| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0578 |
|---|
| Symbol | |
|---|
| ID | 5103738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 533515 |
|---|
| End bp | 533868 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640506482 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190677 |
|---|
| Protein GI | 146303361 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.5371 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAG CTCTCACATA TGATAAGGAG AGAAATCTAA AACCGTTGGA GGAATCGGAA
ATAATTGCTA TTATTGATGA AGAAAAGAGG GAAGTGGAGC AATACGAGAA TCCTGCCTAC
GCCATGAGCA AGGAAGCCAC AATGGCTGCA ATTCTGGAGT TGGAACCTGA GGCGATAATA
GTCAAGAATC AGTTCCTTTG CCCAGGCTCT TACATGATGA GCTACGGAAG AATAAAGTAT
ATTCCAACAA CTTATAACAC CCTGGATGAA ATTCTCGAGC ATCTAGAAGA GGTAAAGAAA
GGAATTAGGG AAGACCTAGA CGAAGAAATG TATGCAGAGG CCTATCCCGA ATAA
|
|---|
| Protein sequence | MRIALTYDKE RNLKPLEESE IIAIIDEEKR EVEQYENPAY AMSKEATMAA ILELEPEAII
VKNQFLCPGS YMMSYGRIKY IPTTYNTLDE ILEHLEEVKK GIREDLDEEM YAEAYPE
|
|---|
| |