Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0565 |
Symbol | |
ID | 5103725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 517299 |
End bp | 517763 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640506469 |
Product | PadR family transcriptional regulator |
Protein accession | YP_001190664 |
Protein GI | 146303348 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGA ATTTAGAGAG GCTGAGGCGG GGGGCGTTAA AGTTTCTCAT AATGGACGCA CTTCATCACA AACCTATGCA CGCATATGAG ATCATGAAGA CCATAGAGGG TAAGTTCAAT GGAGTCTATA AGCCAAGTCC TGGTTCCCTT TATCCTGTAC TCAAAAACTT GATCAGGGAG GGGCTAGTTA AGGTGGAAGA ACGTGACGGT AAGAAAGTAT ACAGTCTAAC TGACGAAGGT CTCAAGAAAT GGACTGAGGC TAAAGCTAAC ATAAATTCCA TACTTTCAAC CCCTGTGGAT TACAAGAAGC TGGTAAGCAT GCTCTTTGAT ATCAGTCTGG TTCTTTACAG TTACAGGGAC AAAATGTTTG ATGAAAAGGT ATACAACCAG GTAAGCTCAG CCCTTTTAGA GTGTCGTGCT AAGATTGAGA GGATCTTGGA GTCTCAAAGT AACGAGAGTA GATGA
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Protein sequence | MKMNLERLRR GALKFLIMDA LHHKPMHAYE IMKTIEGKFN GVYKPSPGSL YPVLKNLIRE GLVKVEERDG KKVYSLTDEG LKKWTEAKAN INSILSTPVD YKKLVSMLFD ISLVLYSYRD KMFDEKVYNQ VSSALLECRA KIERILESQS NESR
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