| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0558 |
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| Symbol | |
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| ID | 5103718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 512978 |
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| End bp | 514054 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506462 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001190657 |
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| Protein GI | 146303341 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAACTA TGAGTAAAGT AGTCATTGTA GGAGGAGGCA ATGGCGGGCT CGTGGTGGCC
AATAGGCTTC ACGGGAAGGG ACTGGACGTG ACTGTCGTTG AGCCTTCTGA TACCCACCTC
TATCAACCAG GTATTGTGGA TTATGTCCTG GGACATGAAA GGGAAGAGTC CATAGTGAAG
AGTCTAGACT CTCTGTTACC GGTTAAGTGG GTGAAGGGAA GAGCTACTAA GGTAGTGGTT
GAGGATCATT ACGTCATGGT TGGGGACAAG AGATTGGACT ACGATTACCT AGTACTGTCT
CCCGGTGCAG TGAGCAAGAA GATTGAGGGA ACCATGGGTT GGCATACCCT AGAGGAGGGA
AAGAAGCTCA GGGAATTGGT GAACGCGTTC ACGGGGAACT CCATAGTTGT GGGGTATTCG
GGTGTTATTA AGTGTCCTGC TGCCCCCTTT GAGTTTGCCT TCCTTCTCAA GGAGAAGTTC
CCTAAGGCCA AGGTGACTCT GCTTAACCCT GTCTCCAATC CGCCAGAGAT CCAGAGGCCC
ATGTCAGAGG CTTTTGGAAG GAGGGCCAAG GAACTAGGGA TCGAGATCAA GAGAGGCTTC
AGGATAGCCA AGGTAGATGA GAAGCAGAAA GTGATAGAAT CTGAAAGCGG AGAGAAAGTC
CAGTACGACC TGGCATTGAT TGATCCTCCA GTCACTGTGG GTAACGAGTT CAAGGAGATG
ACGGATCAAA GCGGTTTCAT TCCAGTGGAT AGAACCAGCC TAAGGTACAA GAATTACGAT
AACGTGTTCG TGATAGGTGA CGCCAATAAT ATAATGACAC CGCCCAAGAC AGGCTCCAAG
GCGCATTATG AGGCTAAAGT TGTGTCGGAT AACATCATTT CCATGACACA GGCAGGTAGC
AGAAAGGTAT ATGATGGAAG CGCAATCTGT GCTGTCTACG CAAGTTCAAA GAAAGGATAT
CTGGTCAGGA TGAACTTTGA GAAAAGTTCA ATTTATGGAG CGTCTTCATT ATTTTACGAA
ATGAAGAAAG CATTCACCCA CCTGTATTGG ACTTCATTGA AGGGGACATT TCCGTGA
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| Protein sequence | MLTMSKVVIV GGGNGGLVVA NRLHGKGLDV TVVEPSDTHL YQPGIVDYVL GHEREESIVK
SLDSLLPVKW VKGRATKVVV EDHYVMVGDK RLDYDYLVLS PGAVSKKIEG TMGWHTLEEG
KKLRELVNAF TGNSIVVGYS GVIKCPAAPF EFAFLLKEKF PKAKVTLLNP VSNPPEIQRP
MSEAFGRRAK ELGIEIKRGF RIAKVDEKQK VIESESGEKV QYDLALIDPP VTVGNEFKEM
TDQSGFIPVD RTSLRYKNYD NVFVIGDANN IMTPPKTGSK AHYEAKVVSD NIISMTQAGS
RKVYDGSAIC AVYASSKKGY LVRMNFEKSS IYGASSLFYE MKKAFTHLYW TSLKGTFP
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