| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0553 |
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| Symbol | |
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| ID | 5103713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 508374 |
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| End bp | 509756 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506457 |
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| Product | FAD linked oxidase domain-containing protein |
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| Protein accession | YP_001190652 |
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| Protein GI | 146303336 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.812155 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTAC ACGATGAGTT GGCCTCCATC GTGGGAGACG AGTGGGTAAT AACTGGGCAG
GAGGCTAAGC TTTACTCCTA CGACGGATTT ACCGCAGTGG AAGGAGACCC CTCGATGGTG
GTATTACCAG GTAACGAGGA GGAGGCAATC AGAGTTGTGA GATTACTCCT TGAGAAGGGA
GCGAAGTTCG TCATGAGAGG AACAGGGACC AGTCTCAGCG GAGCCACTGT TCCCTTGGAT
GGGGAAGTAG TGGTTGGAAT GGCTAGGCTA AACAGGGTGT ACTCCCAGTC TGGCCTAGAG
ATTGAGGTAG GCCCTGGGAT AGCAAACGTA ATGGTGACTA AGAACGCGCC TCCACACCTG
TTTTACGCTC CAGATCCATC CAGTTATACC GTATCCTCAA TAGGGGGTAA CATATCCCAC
GACTCTGGAG GTGTTCACGT GGTAAAGTAT GGCCCCACGG TTAACAGCGT ATTGGGCGTA
AGGGTGATCC TACCTCACGG GGAGGTAGAG GACCTAGAGT ATGGTCCATT TCTGTCAGCC
CTACCCATAT TTGTGGGCTC CGAGGGGACT CTAGGGGGGA TCTTGAGAGC TAGGCTCAGG
CTCTTTCCAA AGCCAGCAAC CAGGAAGAGC ATGTTTGCCA CATTTGACAG CGTGAGAGAC
GCAGGGAGAG CTGTGGTCGG AATATTTAAG GCAGGAGTTA TACCCTCCGC GCTGGAGATG
ATGGACAGGA ATACCATAAG GGTAGTTGAG AGGAGTAGGT ACAGGGCCAA CGCTCCAGAC
GTGGAGGCAC TCCTCCTCAT AGAGCTAGAT GGAAGTGAAG AGGCAGTTAA CGAGCAGGAG
ATCCTGGTGA GCCAGGTAAT CAAGGATAAC AACGGAGAGA GAATATATCC AGATGACGGT
GGAACAAAGC TCTGGAATGC TAGGAAGGGA GCATTCCCAG CAATGGGGGT AGTTGCCCCG
GCATACCTAA CCCTAGACTG TAACGTTCCC AGGGAGGCCT TACCTGATGT CCTCGCAGGT
GTAGCGGAAA TAGGGAGGAA AAAAGGTGTT CTAGTTGCAA ACGTCTTTCA TGCTGGAGAC
GGAAATCTTC ATCCCCTCAT TCCCTACTAC CCGGATAAGG CTGAAAGCCT GAAGTTAGCC
CTAGAAACTA GCGCAGAGAT TATGAAACTT GCTCTGAGAA TGGGAGGGGT GCCTTCGGGG
GAACATGGAA TAGGGATTGA GAAATTGAAG TACATGGACA TGTATTACAC CGAGGAGGAA
CTCCAGGTTC AAAGGAGAAT CAAGAGGACA TTTGACCAGG ATAACCTCCT GAATCCCTGT
AAGCTCCTCG GAGGGTGCAA GCCCAGGAAC GAGGTTACGA GGTGGATGTG GGAATGGGAC
TAG
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| Protein sequence | MNLHDELASI VGDEWVITGQ EAKLYSYDGF TAVEGDPSMV VLPGNEEEAI RVVRLLLEKG
AKFVMRGTGT SLSGATVPLD GEVVVGMARL NRVYSQSGLE IEVGPGIANV MVTKNAPPHL
FYAPDPSSYT VSSIGGNISH DSGGVHVVKY GPTVNSVLGV RVILPHGEVE DLEYGPFLSA
LPIFVGSEGT LGGILRARLR LFPKPATRKS MFATFDSVRD AGRAVVGIFK AGVIPSALEM
MDRNTIRVVE RSRYRANAPD VEALLLIELD GSEEAVNEQE ILVSQVIKDN NGERIYPDDG
GTKLWNARKG AFPAMGVVAP AYLTLDCNVP REALPDVLAG VAEIGRKKGV LVANVFHAGD
GNLHPLIPYY PDKAESLKLA LETSAEIMKL ALRMGGVPSG EHGIGIEKLK YMDMYYTEEE
LQVQRRIKRT FDQDNLLNPC KLLGGCKPRN EVTRWMWEWD
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