| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0549 |
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| Symbol | |
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| ID | 5103709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 505004 |
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| End bp | 505858 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506453 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190648 |
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| Protein GI | 146303332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0730] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.50892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTCA TACTGACTTT TTTGTCAATC CTTCTTTTCA GCATCCTAGC GGGTTTTCTA
GGGTCACTTA CTGGGTTGGG TGGAGGGACG GTCCTGGTAC CGATCCTAAC TCTCTACCTG
GGAATACCCA TTATTTACGC AACTGGTTCT AGTCTGATCT CCACAATAGC CACGTCCAGC
GGTTCCGCTT CGGCATATGT TAAGGAGAGG ATCACTAGCG TTAGAATAGG GATCTCACTG
GAGATCGCAA CTACCGCGGG GTCAATTGTC GGTTCCTTGA CTGTGGCTTA CATTTACTCT
TTACATCTTC AGTACCTAGT TTATATTGTA TTTGGAATAG TTCTCCTTTT CTCCATATAT
CCCACGCTCA AGAAGATGAA GGGTGAGTTC CCAACTCCTA AACCACCGGA TTGGACCACA
AAGCTCCTAA ACCTTTACGG GGAGTATTTC GACCCTGCAA ATAACACTAC CGTCAAGTAC
TGGGGAGTTA GGTGGTGGCT CGGCCTGATC GTGATGTTCT TCGCTGGGTT CATATCTGGA
TTACTGGGAA TAGGTTCTGG TGCTCTCAAA GTAATAGGAA TGGACTACGC CATGAATTTG
CCCATGAAGG TCACAACTAC TACGAGTAAC TTCATGATAG GGGTTACAGC TGCTACTGGG
AGTGGAATTT ACTGGGCATT GGGTTACATT CAGCCCTTTC TAGCTGCCCC AACTGCCATA
GGGGTTCTAA TAGGCTCCCT GGTGGGGACT AGGGTTCTTG TCAGGCTGAA GAACAAGAGG
ATCAGGGCTG TGTTCCTGGT AATACTGGCG TTCCTTGGAA TACAAATGAT CCTTAGGGGG
TTGGGGGTGT TCTGA
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| Protein sequence | MSVILTFLSI LLFSILAGFL GSLTGLGGGT VLVPILTLYL GIPIIYATGS SLISTIATSS
GSASAYVKER ITSVRIGISL EIATTAGSIV GSLTVAYIYS LHLQYLVYIV FGIVLLFSIY
PTLKKMKGEF PTPKPPDWTT KLLNLYGEYF DPANNTTVKY WGVRWWLGLI VMFFAGFISG
LLGIGSGALK VIGMDYAMNL PMKVTTTTSN FMIGVTAATG SGIYWALGYI QPFLAAPTAI
GVLIGSLVGT RVLVRLKNKR IRAVFLVILA FLGIQMILRG LGVF
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