| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0533 |
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| Symbol | |
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| ID | 5103693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 490082 |
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| End bp | 491128 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506437 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001190632 |
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| Protein GI | 146303316 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.072372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGAA CTGTTTTCGT GTGGGATGAT GCTTACCTGG ATTACTCCTT TCCAGGGGAT
CATCCCTTTA AGTCGTTTAG GGAGAGCAGA GCTAAGAAGT ACATGGAGGA GAGGGGGTTC
TTTCATCACA TGGAAATGAG GAGGCCGGAT CCAGACGATG AGAGTATTCT CTTGAATGTT
CACTCTCGGG ATTACGTGGA CTTCGTGAAG ATGAAGAGTC AGGAGGGGGA GGGATTACTG
GATTATGGGG ATACTCCAGC CTTCAAAGGC GTCTTCGAGA GCGCACTGAG AAGGGTAATG
GGTAGCGTTA CGGGGATTAG GTTGCTGGCA CAGGGCTACG ACCACGCAGT GAACTTGGGA
GGGGGTTTAC ATCACGCGCA ATGGGGATCA GCATCTGGGT TCTGCGTCTT CAATGACGTT
GCCATTGCGG CAAAGGAGGG AGAGAAGTTC TTCAGAAGGA TCGCAATTGT TGATGTGGAC
GGACATCACG GCGACGGAAC CCAAGCGTTA CTTTACGATG ACCCCAATGT TCTGAAGATA
TCCCTGCATA TGTATCATAG GGGGTTTTTC CCCGGTACGG GAGAGATAAA CGAAATTGGA
ACGGGGAAGG GAAAGGGGTA TACGGTTAAC GTTCCTCTGC CTCCTGGAAC CGCAGATGAT
GCCTATATTT ACGCCTTTGA TAACGTGGTT ATACCCCTTC TGGATAGGTT TCAGCCAGAG
GCCATAATCA TCCAGGAGGG AGGAGACTCC CATTTCGACG ATCCTCTCGT GGAGCTTAAG
TTGAGCACCA GGGGTTACCT TGCATTGGTC AAGAGGATCC ATGATCTAGC CCACAGGGGC
ACTGGAAAGA TCCTGTTACT AGGGGGAGGA GGTTATAACT ACGATGCGAC TGCGAGAGTG
TGGACAGTTT CCGTAGCTGA GTTACTCGGA CTTGATGATC AGGAGGTTGA GTCTCTGCAC
GACTGCTGTC TTACCTCATC AAGTGCCTAC ATAATGGAGA GAGTTAAGCA GGTTGTAGAA
GAAGTGAAAA AAGTTCACGG AATCTAG
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| Protein sequence | MHRTVFVWDD AYLDYSFPGD HPFKSFRESR AKKYMEERGF FHHMEMRRPD PDDESILLNV
HSRDYVDFVK MKSQEGEGLL DYGDTPAFKG VFESALRRVM GSVTGIRLLA QGYDHAVNLG
GGLHHAQWGS ASGFCVFNDV AIAAKEGEKF FRRIAIVDVD GHHGDGTQAL LYDDPNVLKI
SLHMYHRGFF PGTGEINEIG TGKGKGYTVN VPLPPGTADD AYIYAFDNVV IPLLDRFQPE
AIIIQEGGDS HFDDPLVELK LSTRGYLALV KRIHDLAHRG TGKILLLGGG GYNYDATARV
WTVSVAELLG LDDQEVESLH DCCLTSSSAY IMERVKQVVE EVKKVHGI
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