| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0514 |
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| Symbol | |
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| ID | 5103674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 470094 |
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| End bp | 471260 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506418 |
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| Product | peptidase U32 |
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| Protein accession | YP_001190613 |
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| Protein GI | 146303297 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000252039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000774187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTATAACA AGTTTAAATA CAATAAAAAT GATCTAAATT TCATGAGGCT CGTTGTAGGA
ACAAATTTCG ACGATGAACT CATAGGGAAA ATAAAGGAAT ACCCAGTTAG CCACATCTTT
GGGAGTCACA CAAAAACCTT GACGGGACAC GGGAGAGCTT CCTTCATCCT CCCACAGGTT
GACGATGAGA GGTTCAAGGC CCATCTCGAC GTCGTGCATG AGGCTGGAAT AAAGTTCCTT
TATACCATGA ATACTGCTAC GCTGAACGGT GGGGAATACT CTGAGAAGTT CGTGAAGAGG
TTATCAGAGG AAATTGAAAG ACTCGTGGGT TTCGGAGTAG ATGGCTTCGT CGTGGCTCTA
CCCTTTCTAG TCAGGTTAAT AAAGAGGGAG CATCCGGAGT TGGAGGTGTC TATCTCGTCC
TACGCTAGAG TCTACAATAT CAGGGAGGTT GAGAACTTCA TGGAACTTGG GGCGGACACG
GTGATACTTC ACGAGGACGA TAACAGGAAC TTCAGGTTGT TGAGATCTCT ACAGAAGTTA
CAGAGGAGGG TTGATTTCGA GCTTATTACC AACAATTCTT GCCTTTGGGG TTGCGTCTAT
AGGAGAACGC ATGATATAGT CTCGTCACAG AGCTCAGTTG AGGGGGGAAT AGAGGCGTGG
TTTGAGTATC CCATTCTCTT CTGTGCTACA GACGTTAGGA ACGACTTGGC TAACATCATT
AGGATGAGAT GGATAAGGCC AGAGGACCTG GTAGTATATG AAGGCCTGGG ATTTGATAGG
TTCAAAATTG CGGGAAGGAA CAAGAGGACA GAGTGGTTAG TTAGGGCGGT AAAAGCTTAC
GCCAACAGGA AGTACGACGG CAACTTGCTG GACATAGTCA GCTACCCTCA GGGAAGGGCT
GTCCCGAAGG TAATGGAGAA GGTGGGAGGT CCTAAGGATT ATGACGTGTT AAAGGAGGTT
TACGTGGATA ACACAAAGTT TCCGCCCAAT TGGCTGAGCT TTTTCAGGTA TAACCAATGC
GAGGAGAGAT CTTGCTCAGA GTGCGGTTAC TGCACTGCAG TGGCAAGGGA AGTTATGAGG
GTTGAGGGGA AAGAGATCTC TGAACTTGAC TTAGGGAAGA TTCAAGCGCC CATAGATCTA
ATTCCGAGGT TTGGTGGAAA TGGTTAG
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| Protein sequence | MYNKFKYNKN DLNFMRLVVG TNFDDELIGK IKEYPVSHIF GSHTKTLTGH GRASFILPQV
DDERFKAHLD VVHEAGIKFL YTMNTATLNG GEYSEKFVKR LSEEIERLVG FGVDGFVVAL
PFLVRLIKRE HPELEVSISS YARVYNIREV ENFMELGADT VILHEDDNRN FRLLRSLQKL
QRRVDFELIT NNSCLWGCVY RRTHDIVSSQ SSVEGGIEAW FEYPILFCAT DVRNDLANII
RMRWIRPEDL VVYEGLGFDR FKIAGRNKRT EWLVRAVKAY ANRKYDGNLL DIVSYPQGRA
VPKVMEKVGG PKDYDVLKEV YVDNTKFPPN WLSFFRYNQC EERSCSECGY CTAVAREVMR
VEGKEISELD LGKIQAPIDL IPRFGGNG
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