Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0512 |
Symbol | |
ID | 5103672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 468378 |
End bp | 469421 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640506416 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001190611 |
Protein GI | 146303295 |
COG category | [R] General function prediction only |
COG ID | [COG0535] Predicted Fe-S oxidoreductases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000575478 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000767983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTAGCTC CATACGTTGT TGTCCTGGAA AGCACAAAGG CATGCGATCT GGCCTGTAAA CACTGCAGGG CTAAGGCCAT ACCCAACAGG TTACCAGGAG AACTAACCAC TGAGGAAGTT AAGTCCCTTG TGGATGACCT CGCCTCTTCA GGTGTGAAAC TCTTCGTAAT AAGTGGGGGA GATGCACTGA AGAGAGATGA TATCTTTGAA ATACTCGAAT ACTCCTCAGC GAAGATAACC ACGGCGTTGT CCCCCAGTGG AAGTAGGATA AACGTGGAGG TGGCCAAACG CATCAAGGAC ACTGGAGTTA GTATGGTCTC CATTAGCGTA GATGGCCCCG AAGAGATACA TGACGAATTC AGGGGAGTTA GGGGAGCCTT CAAAATGGCT AAACAGGCTG TGGATTCCCT ACACGAGGTG AAACTACCAG TGCAGATAAA TTCCACCATC AGTAGGTATA ACGTGGATCA TCTGCAGGAG CTTAGAAAGA CGGTTGAGGC CCTGAGGCCC GTGTACTGGG ACGTCTTCAT GCTCATTCCC ACGGGGAGAG CCACCAAGGA AATGATGATT ACCTCCGAGC AAGCGGAGGA GGTAATGAGG ACCATAACCA AGTGGAGGAT GGAAGGCCTC AACGTGAGGA TGACGTGTGC CCCCTACCTA GTGAGGGTAA TGAACGAGAT GGGAGTTGTG AGACCTTTAC CTCCTGACAA GAACTATGGA AGAAGAAGCG TGAACGGTGC AAGGGGATGC ATGGCTGGAA ACGGATATGC CTTCGTCGCA TATGACGGTA CAGTTTATCC CTGTGGTTTC CTTCCCATTC CAGCAGGGAA CGTGAGATTT AGACGGTTTA GCGAGATCTA CGAACAGTCT CCAGTTTTCA AGAGTTTGAG GGAACCGTCG AAGCTAGGAG GAAAGTGTGG TTTATGCGAA TATAGGTCAG TGTGCGGAGG ATGCAGGGCA AGGGCCTTCA GCTTAACCGA GAACTTCATG GATGAGGACC CCTTCTGCAC CTACGTTCCA AGAACGCTTA GGGTGAGAGC ATGA
|
Protein sequence | MVAPYVVVLE STKACDLACK HCRAKAIPNR LPGELTTEEV KSLVDDLASS GVKLFVISGG DALKRDDIFE ILEYSSAKIT TALSPSGSRI NVEVAKRIKD TGVSMVSISV DGPEEIHDEF RGVRGAFKMA KQAVDSLHEV KLPVQINSTI SRYNVDHLQE LRKTVEALRP VYWDVFMLIP TGRATKEMMI TSEQAEEVMR TITKWRMEGL NVRMTCAPYL VRVMNEMGVV RPLPPDKNYG RRSVNGARGC MAGNGYAFVA YDGTVYPCGF LPIPAGNVRF RRFSEIYEQS PVFKSLREPS KLGGKCGLCE YRSVCGGCRA RAFSLTENFM DEDPFCTYVP RTLRVRA
|
| |