| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0505 |
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| Symbol | |
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| ID | 5103665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 461243 |
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| End bp | 463600 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506409 |
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| Product | plasma-membrane proton-efflux P-type ATPase |
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| Protein accession | YP_001190604 |
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| Protein GI | 146303288 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01647] plasma-membrane proton-efflux P-type ATPase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0587052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA ATGAGACACT GGACTCTCTT CTAAAATCCC TAAACACCAC TTTGAATGGG
CTAACCTCAG AGGAAGCCAA ATCCAGGCTT CTCAAGTTTG GACCCAACGA AGTCAAGGAG
AAGAAGAGGA GTCCGGTCAT TGAATTCCTC CTAAAGTTCT GGGCTCCAGT GCCATGGATG
TTGGAAGTAA CGGTAGTACT TACCTTTATA CTTCAGAAAT ACCTTGACAT GTACATAATT
CTCTTTCTCC TAGTTTTTAA CTCCGTAATA AGTTTCGTCC AAGAGCACAG GGCAGAGAAC
GCTGTGGAAC TTCTAAAACG AAGACTCCAG GTCATGGCTA AGGTAAAGAG AGACGGGAAG
TGGATCTCAA TCCAGGCCAA GGAGTTGGTG CCTGGGGATC TAGTTACCAT AAGAATTGGA
GACATTGTGC CCGCTGACAT TAGGATAGTG GAAGGGGAAG TTCTCGTGGA TCAGTCAGCC
CTGACCGGGG AGTCACAGCC TGTGGAAAGG AAAGTCTTGG ACACGGTTTA CTCTGGCTCC
GTAGTCAAGA GAGGTGAAGC CAAGGGAATA GTGATAAGTA CAGGGGAAAG GACCTATTTC
GGCAAGACCA CTCAACTAGT TCAGGTAGCT AAGGCCAAAT CCCATATTCA GGACATAATC
ATGAAGATCG TGAGATACCT GATAATGATT GACGTTACCC TAGTGGTTGC CCTCACTTTA
TTCGCACTTT TAGCCGGGAT AAGACTTGAG GAAGTTTTAC CTTTCTCCTT AGTTGTCCTA
ATAGCCTCAG TGCCAGTGGC TCTTCCTGCA ACTTTCACCA TAGCCATGGC CTTGGGCGCC
GAGGAGCTTT CGAGAAAGGG AATCTTGGTT ACCAGGCTTA ACGCTTCTGA GGATGCTGCC
AGTATGGATG TCCTTAACCT AGATAAGACT GGAACTCTCA CCGAGAACAG GCTTAGGGTT
GGCGATCCTG TCCCTTCAAA GGGTTACACT GAAAGAGACG TAATTGTTTA TGCCCTTCTA
GCATCAGATG AGGCAACACT GGATCCCATA GATGTCGCAG TGGCTGAGTG TTCCAGGGAG
AGGGGAGTCA CATCATCCTA CTCCAGGTTG CACTTTGAGC CTTTTGATCC GTCCAAGAAA
AGGACGGAAG CCATAATATC TACACCAGAG GGCGAACTCA GGATTATGAA GGGAGCCCCT
CAGGTAATAG AGCAGTTGGC GAGTGTCGAT AAGAAATGGT TTGATGAACA GGTAAGTTTA
CTCTCATCGA AGGGCTTTAG GGTGATCGCT GTGGCTGCTG GGAGGGAAAA ACTTGAGGTC
GTAGGTCTGC TTCCGCTTTA CGATAGACCT AGACCTGACA GTGCGAGGTT CATCCAAGAG
ATAAAGAATC TAGGTGTGTC CCCTAAGATG GTAACAGGCG ACAACTCACT GATAGCTGTC
GAGGTAGCTA AGGAAGTGGG TATAGGGGAT AGGGTTTGCG ATATGAGAGA GGTTAGGGAA
GCATCTAAAC AGGAAAAGAT GAAGTACGTT GAGGAATGTC AGGTATTTGC GGAAGTCTTT
CCGGAGGATA AGTACACCAT CGTTAAGTCG CTTCAGGATT CTGGGCACGT AGTAGGAATG
ACTGGGGATG GTGTGAATGA TGCGCCAGCG CTAAAACAGG CAGAGGTAGG TATTGCGGTC
TACAATTCCA CAGACGTTGC CAAGGCATCT GCAAGCATGG TGCTGACGCA TGAGGGATTA
ACCGATATTG TTGAGGCCAT TAAGACGGGT AGAAAGATAT ATCAAAGGAT GCTCACCTAC
ACGATGAACA AGATAATAAA GACGCTCCAG GTTGTCCTTT TTCTAACGCT CTCTTTCTTT
GTTACAAGGT TCTTCGTGAC AACTCCCTTT GATGTAATAC TTTTGCTCTT CCTCAACGAT
TTCGTCACCA TGTCAATTGC CACCGACAAC GTCACCTATT CCATGAAACC TGAGAGATGG
AACGTGGACA AAATTGTCAG GTCCTCTCTG ATATTGGCCT TCCTGGTATT GTTGGAATCC
TTCTTTGTCC TCTGGTTTTC AATCTATCTA AGGCTGGACG TAAACCAAAT ACACACAGCG
ACTTTCGATA TGCTTGTCTT TACCGGTCAG TTCACAATTT ACCTCCTTCG AACTAGGGGA
AGAATTTGGA GCTCCAGGCC AAGTAAACCG CTTCTAATCT CGTCTATTGC AGACATATTA
TTTGTACTAA TGATCTCCTC TCTTGGAATA CTGGTCACGC CTATTCCCAT CCAGGTAACC
TTACTAATTC TCTTAACTGC ATTTACTTTC AACTTAATAT TTGATCAGAT TAAGGTAAGT
TTACTAAGAT TAACCTAA
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| Protein sequence | MSDNETLDSL LKSLNTTLNG LTSEEAKSRL LKFGPNEVKE KKRSPVIEFL LKFWAPVPWM
LEVTVVLTFI LQKYLDMYII LFLLVFNSVI SFVQEHRAEN AVELLKRRLQ VMAKVKRDGK
WISIQAKELV PGDLVTIRIG DIVPADIRIV EGEVLVDQSA LTGESQPVER KVLDTVYSGS
VVKRGEAKGI VISTGERTYF GKTTQLVQVA KAKSHIQDII MKIVRYLIMI DVTLVVALTL
FALLAGIRLE EVLPFSLVVL IASVPVALPA TFTIAMALGA EELSRKGILV TRLNASEDAA
SMDVLNLDKT GTLTENRLRV GDPVPSKGYT ERDVIVYALL ASDEATLDPI DVAVAECSRE
RGVTSSYSRL HFEPFDPSKK RTEAIISTPE GELRIMKGAP QVIEQLASVD KKWFDEQVSL
LSSKGFRVIA VAAGREKLEV VGLLPLYDRP RPDSARFIQE IKNLGVSPKM VTGDNSLIAV
EVAKEVGIGD RVCDMREVRE ASKQEKMKYV EECQVFAEVF PEDKYTIVKS LQDSGHVVGM
TGDGVNDAPA LKQAEVGIAV YNSTDVAKAS ASMVLTHEGL TDIVEAIKTG RKIYQRMLTY
TMNKIIKTLQ VVLFLTLSFF VTRFFVTTPF DVILLLFLND FVTMSIATDN VTYSMKPERW
NVDKIVRSSL ILAFLVLLES FFVLWFSIYL RLDVNQIHTA TFDMLVFTGQ FTIYLLRTRG
RIWSSRPSKP LLISSIADIL FVLMISSLGI LVTPIPIQVT LLILLTAFTF NLIFDQIKVS
LLRLT
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