Gene Msed_0491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0491 
Symbol 
ID5103653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp448002 
End bp448169 
Gene Length168 bp 
Protein Length55 aa 
Translation table11 
GC content53% 
IMG OID640506397 
ProductYHS domain-containing protein 
Protein accessionYP_001190592 
Protein GI146303276 
COG category[S] Function unknown 
COG ID[COG3350] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATC CTGTCTGCGG AATGGAAGTT AAGGAGACCT CGGCCTACAA GACCATGTAC 
AAGGGAAAGA TGTACTACTT CTGCAGTCCA CACTGTAAGA CGGCCTTTGA GAAGGACCCC
GAGTCCTATC TCAAGGGTGG CCCAAGGGGA ATGCCCCATG GGCACTGA
 
Protein sequence
MMDPVCGMEV KETSAYKTMY KGKMYYFCSP HCKTAFEKDP ESYLKGGPRG MPHGH