| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0488 |
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| Symbol | |
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| ID | 5103650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 445080 |
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| End bp | 445457 |
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| Gene Length | 378 bp |
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| Protein Length | 125 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506394 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001190589 |
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| Protein GI | 146303273 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCTTTC TGAGGGACAG GGCTGAGGAA TTCCTGGACA ACGCTAGGTA CAGTTTAGGT
AAGGGGTACT ATAACTTAGC CCTCTTCAAC GTGGAGCAAT TCATTCAACT ATACGCTAAA
TATCTCATTT ACCTGAAGGC CGGTGATTTC CCGAAGACCC ACAATATTCT TTCACTCCTA
GAAAGAATCG AGGATCTATA TGAGGATAAG TGCAACATCA GCGTGTTTAG AAGGGACAAT
AAGGACTTCC TCTACGTCAT CTATTTCTCG TATACCCAGG GAAGGTACTT TGGAACTGTC
TTTTCAAGAG ACGATGCGGA AAGAGCAGTC TCCCTTGCTA ACAAGTTTAG GGAGCTGGGA
CAATGTCTGA CTACCTGA
|
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| Protein sequence | MSFLRDRAEE FLDNARYSLG KGYYNLALFN VEQFIQLYAK YLIYLKAGDF PKTHNILSLL
ERIEDLYEDK CNISVFRRDN KDFLYVIYFS YTQGRYFGTV FSRDDAERAV SLANKFRELG
QCLTT
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