| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0485 |
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| Symbol | |
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| ID | 5103647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 440930 |
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| End bp | 442687 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506391 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001190586 |
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| Protein GI | 146303270 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCCA AAGAAGAAGT TCGAAGGCAA GATAGAGAAA AACTTCTAGA ATGGGCAAGG
CAATATCAAG AAGTCCAAGA GAGAGAAGCC AGAAGAAACA TCTTCATGAA AGTGTTGTAT
TCCGAAGACT ATAAAACTAT GGCTATAAAA TTAATATTTG CTGGATTAGT ATTTCTATTC
ATAGGCGGTG CGTTTGCCCT ATTCATTAGG GGGCAAGCTG GACTCAGTAG CGAAGGCGTA
CCGGTAGTCC TCGACCCATC ATACTACTTC CAGGCCATGA CCAACCACGT CATGGACATG
ATCTTCGGTG CAGTATTCAA TGTAGTGTTT GCGGTATCTT TCTACATGAT ACCTGCTATG
AACGGATCCA GACTCATAAA GTGGCCAAAG CTAGCTAATG CAGGTTTCTG GATAAGCATT
ATCGCGCTGT TTATGATGAA CTTCGGCGGG GTTGAGAACC AGTATCTCTT CACGTTCTTG
AACCCATTAA AGGCATCTCC CACCTGGTAC ATAGGCTATG GTATGATGGT TGTGGGCGAA
TGGATGGAAA TGGCTTCCGT GCTAGGTACT TCCTTTCAAG GAAGAGTCCC AGGTAGACTG
GTCCCCACTG CCATTGGGTT CATTGTCATG GACATGATAA TGATGGCCTT AGCTAACATA
TCTGTATTCA TTGCTGACAT GTGGAGCTTA TTCTCACCCA TAGGTGGCCT GAACATATAC
CTGTTCGGTA TTCCCAACGC TGAGGTGTGG AAGGGATTGT TCTGGTTCGC TGACCATCCC
CTAGTGTATT TCGCCCCATA TGCATTAACC GGTGCCATAG TTGCCATAAC TCCGCTCTAC
GCGAGAAGAC CAATGTATAG CGTGAGGTTT ACGAGATGGC TCATCCCAGT CCTCTTCGTG
TTGGGATCTA GCGTCTACGT TCACCACATA GTGGACGACC CGTGGCCCCT GATCCTGAGG
GATATATTCG CCCAGACCAG CACTGCACTT ATTGCCGTTC CCTTCGCTGC CCTCTGGCTA
CTCTTCTTCA TCACCCTAGG CGATCCCAGG AAGTTGAAGT GGGATCCAGG GTTCGCCTTC
ATATTTGCCG CAGCCGTCTG GAACATAATC GGAGGAATAC AGGCTGAGCC CACCAATCCA
ACACCTTCGC TGGACCCAAC GATACATAAC ACAGGATGGA TATTCGGTCA CTTCCACATA
ATGCTAGCAA TATACTCCGT AGGCGGTTTG CTCGGTGCCT TATACGTAGT GGGACCTGAT
CTCTTCGGCA AGAACTGGTA CAGCACCAAG CTAGGATGGT TGCACTTCTG GGGATGGCAG
GCAGGTATGG GATTGTTCGC CATAGCTTCA AGTGAGGGTG GATTCTTCGG GCTAATCAGA
AGGGAAGTAG CGTGGGCCGG CTTCTACGAG GTTTACTACC AGCTCCTACT AATCGGTGGT
TGGCTAGCAG GCTTCGCGAC CATAATATTT GCCTACAACT TGATATTGAC TCTACTATAT
GGCGAGAAAG TGCCTAAGAC AGACATACCC ATGTGGGCAG TTCAGACGGT TGCCATGGAA
AGGTATGCGA TGAGAAGGGA AGGATATAAG GAGGAAGAAA TGCCAGTGGC TCTTCCCGCT
GACGGTATGA TAAGGCTAGA GGAGAACTCG GGAATTTCCA ATGGTACCCC TGTTGGAGCA
AAGGCGCTAG ATAACAACTC GCTAGATGTT AGTAAGGGAA GTCCTAGTAA GGGACTGACG
GATCCAGGAA AAAGTTAA
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| Protein sequence | MASKEEVRRQ DREKLLEWAR QYQEVQEREA RRNIFMKVLY SEDYKTMAIK LIFAGLVFLF
IGGAFALFIR GQAGLSSEGV PVVLDPSYYF QAMTNHVMDM IFGAVFNVVF AVSFYMIPAM
NGSRLIKWPK LANAGFWISI IALFMMNFGG VENQYLFTFL NPLKASPTWY IGYGMMVVGE
WMEMASVLGT SFQGRVPGRL VPTAIGFIVM DMIMMALANI SVFIADMWSL FSPIGGLNIY
LFGIPNAEVW KGLFWFADHP LVYFAPYALT GAIVAITPLY ARRPMYSVRF TRWLIPVLFV
LGSSVYVHHI VDDPWPLILR DIFAQTSTAL IAVPFAALWL LFFITLGDPR KLKWDPGFAF
IFAAAVWNII GGIQAEPTNP TPSLDPTIHN TGWIFGHFHI MLAIYSVGGL LGALYVVGPD
LFGKNWYSTK LGWLHFWGWQ AGMGLFAIAS SEGGFFGLIR REVAWAGFYE VYYQLLLIGG
WLAGFATIIF AYNLILTLLY GEKVPKTDIP MWAVQTVAME RYAMRREGYK EEEMPVALPA
DGMIRLEENS GISNGTPVGA KALDNNSLDV SKGSPSKGLT DPGKS
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