| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0480 |
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| Symbol | |
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| ID | 5103642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 436027 |
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| End bp | 436638 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506386 |
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| Product | cytochrome c oxidase, subunit II |
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| Protein accession | YP_001190581 |
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| Protein GI | 146303265 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.671352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAACGTG GTACTGTAAT AGCTCTATTC TTCGTATTAT GTATTGTAGC TATCATATCT
CTGGAAACGC AGTACAGCAC TTATGATTAC CTAGGGTTCA ATCCTAACTT TGTCTCTGAT
CACATTCCTT CCGGTGAAGG CGTCGTACAC GCAGAATTCA CTAATGCCAT CGGCTCCTAT
AAGGGTCCGT ATGTCATTAT TTACGTTACA GGACAGCAAT GGCACTGGGA CTTCTACCCT
CACGACAAGG TTTACACCAA CTTCACAGTG GTGCCCGTGG GTGAGCCAGT GGTGTTTGTA
ATACATAGTG TAGATGTGTT TCACGAATTC TTCATTCAGG CTGCAACATC TAACTTCACT
ATCCCATTGA GCGTAGGTGC AGAGGCAGTG CCCGGCTACT ACTCATATCT GGTGTATGTG
TTCCCGCAAC CAGGGCTATA TCATGTTGCC TGTGCCGAGT ATTGCGGTAC TGCTGCCACT
GGCCTAGGCC ATTCGTGGCT GGTCGGGACA ATACTGGCCA CCTCCAACGC GACGCTAGCC
TCTCAGATAA CTGGTGGTGT AATGCCACAG GGAACATGGG ACCCATACGT GAATTCCTCA
TCCACGGGGT GA
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| Protein sequence | MKRGTVIALF FVLCIVAIIS LETQYSTYDY LGFNPNFVSD HIPSGEGVVH AEFTNAIGSY
KGPYVIIYVT GQQWHWDFYP HDKVYTNFTV VPVGEPVVFV IHSVDVFHEF FIQAATSNFT
IPLSVGAEAV PGYYSYLVYV FPQPGLYHVA CAEYCGTAAT GLGHSWLVGT ILATSNATLA
SQITGGVMPQ GTWDPYVNSS STG
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