| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0470 |
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| Symbol | |
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| ID | 5105466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 426290 |
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| End bp | 428401 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506376 |
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| Product | vesicle-fusing ATPase |
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| Protein accession | YP_001190571 |
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| Protein GI | 146303255 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATAGTGA TGACTAACGA GTTCTTCGCC AAGGTCTTCA ACGGGACTAG AAAGGTAAAG
AATAGGAATA CCTGTCTCCT AGATCCGGAG CTTATGAGGT CTAAGGGCGT CTCCTATGGC
GAGACCGTAA TTCTCGTAAC CAATAGGATT TACCCTCTCC TTGTGCAAGA GGATAGGGAG
AGTACAGGGG GTATATCAGT CCATGAGGAA GTAATGAGAT ATCTCGGGAT CAGGAACGGA
GAGAAAGTGG TTGTTAGGAA AATTGACCCA GTTGCCCTAA ACTCCCTTGT TTTAGCCCCC
TCATCACAAA AGACCTTTGA CACCAAGAGG CTCAACCTAG AACTGAGAAG CATTCCCGTG
TCGAGGGGCA TGCCCCTAAG TACTAAGCAA GGAGAGTTTG CCGTGGTTTC CTTTGAACCT
AGGGCCGAGG TTGGCATGAT AGTCGGGGAG ACAGAAATTG AAATAACTGG CGAAATAATC
AAGCAAACCC AAAAGAACAT ACCGCTAGTA TCATTGGAGG ACGTAGGAGG TCTAACTGAT
CAAATTATGT CGCTCAAGGA AATCATAGAT ATAGCATTGG TAAAGCCCGA GGTTCCGAGA
CTCTTTGGCT TCCGCCCTCC CAAGGGGGTA CTCCTATATG GTCCACCGGG TACAGGAAAG
ACCTTGATAG CTAAGGCCCT AGCTAACTCC GTTATGGCAA ACTTCTTCTT CATCAGTGGA
CCTGAAATAG GCTCCAAGTA CTACGGAGAA AGTGAGAAAA GACTGAGGGA GATATTCGAA
CAGGCAGAGA AATCCGCCCC ATCAATGATA TTCATAGACG AAATTGATGC CATTGCCCCC
AATAGGGATG TAACTAACGG CGAGGCTGAC AAGAGAATTG TGGCCCAATT GCTTACCCTC
ATGGACGGAG TGTCCTCAAG TGGGGGACTG CTGGTTTTGG GGGCAACAAA CAGGCCAAAC
GCCATTGATC CTGCCCTCAG GAGACCTGGA AGGTTCGACA GGGAGATAGA GATACCTGTC
CCCGATAAGA GGGCACGATT GGACATCATA AAGATACATA CCAGAAGGAT TCCGCTTGCT
GAGGATGTGG ACCTAGAGGC CATTGCTTCC ATGACCAACG GGTTTGTTGG GGCAGACCTT
GAGGCCCTAG TTAGGGAAGC TACAATGAGT GCCCTACGCA GGACCCAGAA TCCAGAGGAG
GTTAAGGTAA CAATGGCAGA CTTTCAAAAC GCCATGAAGA TTGTGGAGCC GTCAGCCTTG
AGGGAGTTTA GGGTAGAAAT TCCAAACGTA ACGTGGGAGG ACATCATAGG ACTGGACCAG
GTGAAACAGG AGTTGAAGGA GGTCGTGGAG TGGCCTCTCA AGTATTCCAA GTTGTACGAG
GAAATGAGAG CAGAAGTGCC ATCTGGCGTA ATGCTTTACG GTCCCCCAGG AACAGGTAAG
ACCATGTTGG CAAAGGCAGT GGCACACGAG AGTGGGGCTA ACTTCATAGC GGTGAGCGGA
CCTGAACTCA TGAACATGTG GGTTGGTGAG ACCGAGAGAG CCATAAGGGA GGTGTTTAAG
AGGGCAAGAC AGGCATCACC AACAGTCGTG TTCTTTGACG AGATTGATGC AATTGCCACT
GTTAGGGGAT CAGACCCCAA CAAGGTGACG GACAGGGCAC TGAGCCAAAT GCTCACAGAG
ATGGACGGAG TTTCCTCTAG GAAGGAGAGA GTGATATTTA TGGCAGCAAC GAATAGGCCA
GACATAGTGG ATCCCGCACT AATCAGGCCT GGAAGACTTG AGAAGTTAGT TTACGTCCCT
CCACCCGATT TCGAGACTAG GAAAATAATG TTCCAGAGGC TGGTCACTAA ACATCCCTTT
GACGAATCCA TTGATTTCTC CTACTTGGCT AAGATGAGTG AGAGTTTTAC CCCAGCCGAT
ATCAAGGGAG TTGTTAACAG GGCAGTCCTT TTGGCCATCA GGAGGTCAGT GAAGGAAGGG
AAAACCTCAA AGATAACCTT CGAGGACCTT GTGGAGTCCC TGAAATCGGT GAAGCCCACG
GTGACTCAAG CCATGGTAAA CTACTATAAT TCATTCATGG AAAGGGTGAA GTTAACTGGC
ACATACGCTT GA
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| Protein sequence | MIVMTNEFFA KVFNGTRKVK NRNTCLLDPE LMRSKGVSYG ETVILVTNRI YPLLVQEDRE
STGGISVHEE VMRYLGIRNG EKVVVRKIDP VALNSLVLAP SSQKTFDTKR LNLELRSIPV
SRGMPLSTKQ GEFAVVSFEP RAEVGMIVGE TEIEITGEII KQTQKNIPLV SLEDVGGLTD
QIMSLKEIID IALVKPEVPR LFGFRPPKGV LLYGPPGTGK TLIAKALANS VMANFFFISG
PEIGSKYYGE SEKRLREIFE QAEKSAPSMI FIDEIDAIAP NRDVTNGEAD KRIVAQLLTL
MDGVSSSGGL LVLGATNRPN AIDPALRRPG RFDREIEIPV PDKRARLDII KIHTRRIPLA
EDVDLEAIAS MTNGFVGADL EALVREATMS ALRRTQNPEE VKVTMADFQN AMKIVEPSAL
REFRVEIPNV TWEDIIGLDQ VKQELKEVVE WPLKYSKLYE EMRAEVPSGV MLYGPPGTGK
TMLAKAVAHE SGANFIAVSG PELMNMWVGE TERAIREVFK RARQASPTVV FFDEIDAIAT
VRGSDPNKVT DRALSQMLTE MDGVSSRKER VIFMAATNRP DIVDPALIRP GRLEKLVYVP
PPDFETRKIM FQRLVTKHPF DESIDFSYLA KMSESFTPAD IKGVVNRAVL LAIRRSVKEG
KTSKITFEDL VESLKSVKPT VTQAMVNYYN SFMERVKLTG TYA
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