| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0461 |
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| Symbol | |
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| ID | 5105457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 414844 |
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| End bp | 416379 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506367 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001190562 |
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| Protein GI | 146303246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCTTA AAAAAGAACT CAGCTATCTG GATCTAATTA TCCTCGGAAT AGCCGGGGCT
GTAGGAACTG GTGCACTTTT CAGTACTGCA GGAATGACTG CAGACGCAGG TCCTTCAGCA
GTTATTTCGT GGATACTAGG GGGAGTATTC TACCTTTTTA TCGGACTTAC TTATAGCGAA
ATTTCAATGA ACCTGCCTGA GGCTGGTGGT CCATCCAGGT ATAGTCTGTA TTCACATGGG
AAACTTACCA ATCTGATTAA TGCAATGGCG GATCTAGTGT GGTACCTTTT CATTCCACCC
ATAGAGGCCC TGGCCGTGGT TGAGGGACTT ACTTTCTTTT TCCCTTCCTT GCTTACCCCT
GCCGGGACTC CAACCCTCCT CGGAGGGCTT GTTGGAGTTA TCCTCCTTAT CCTCTTCATT
CCGTTCAACT ATTTCGGCGT CAAGGCTTTT GGAAGGTCAA CCACATCCTT CGGAACGGTT
AAACTAGTAT TGTACGTAGC CCTCGCGCTA GGCGTTATGG GAGTGTTTTT CTCTGCCAAG
AACTTCGTGA GTTACGGCGG TCTAGCGCCA TTTGGACTAG CGGGAATGTT CACGGCAATA
CCTCTCGCCA TGTTTGCCTT CGGAGGAATA AGAGTAATAC CAGATTATGC AGAGGAGGCC
AGGGATAGGA GAAGGCTCTC GTCTGCCATA ATTCTAACCG TGATTGGACA AACCTTGATC
TACGTATTAT TTGCTATCGC ATTCGTTGGG GGAATAAACT GGAGTAAAGT TGCCCTATCT
CCAGGAAACT GGACAGGGGT AACCTCAGCC CTTCCAGGAA ACCCATTCGT GGACCTATCG
CAGAGCAATT CAGCTCTTCT GATACTGGCT CTCATCGTGG CACTGATTGG GCCATTCGTG
ACAGGTTACA TCTACCTTGG GGCTGGGACA AGGGTTCTGT TTGCCATGGG GAGGACAGGA
ATAGTCACTA AACTTATGAA GCAGTTACAC AGCACCTACT CAATCCCCGT TTGGGCTCTC
CTCGTGTTCG GGATCGTGGG CGCAGTGATA ACTTTCCTGA CATCCCCAAT ACCCACAATA
TACAGCCTGA TTAGCGATGC CGTTGTTGCT GGTTATCTAG GATTTGCAGT GAACCCAGTG
GCTATGATGG CCATGAGGAA GAAATACGAG TATAAACTCA AGGGGGGACC AGTGATAGCA
GCTCTAGCCT TCGTGTTCTC ATCTCTCATT GCCTTCTGGA GTGGCTGGCC ATCGGTGCCT
TACTCGGTTA TCATAATAGC CATAGCTGTT GGGATATTCG GTGCTGTATA CAGGGCTTTT
GAAAACGTCT TCAACTCTCT ATGGTACATT GCCTATATAG CTTTCATTAC CCTCATGACC
TACATAGGAA GTGATGGAGC ACTCTCCCTG ATCAACTTCT ACCTAGCATC TGCACTTGTC
GCCGTAATCT CGGTTGCAGT GTTTTTCCCA TGGGGTATAA TATCAGCGAA GAGAGACATA
AAAATCCCAA CAGAACAAGA AATAGAAAAT CAATAA
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| Protein sequence | MPLKKELSYL DLIILGIAGA VGTGALFSTA GMTADAGPSA VISWILGGVF YLFIGLTYSE
ISMNLPEAGG PSRYSLYSHG KLTNLINAMA DLVWYLFIPP IEALAVVEGL TFFFPSLLTP
AGTPTLLGGL VGVILLILFI PFNYFGVKAF GRSTTSFGTV KLVLYVALAL GVMGVFFSAK
NFVSYGGLAP FGLAGMFTAI PLAMFAFGGI RVIPDYAEEA RDRRRLSSAI ILTVIGQTLI
YVLFAIAFVG GINWSKVALS PGNWTGVTSA LPGNPFVDLS QSNSALLILA LIVALIGPFV
TGYIYLGAGT RVLFAMGRTG IVTKLMKQLH STYSIPVWAL LVFGIVGAVI TFLTSPIPTI
YSLISDAVVA GYLGFAVNPV AMMAMRKKYE YKLKGGPVIA ALAFVFSSLI AFWSGWPSVP
YSVIIIAIAV GIFGAVYRAF ENVFNSLWYI AYIAFITLMT YIGSDGALSL INFYLASALV
AVISVAVFFP WGIISAKRDI KIPTEQEIEN Q
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