| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0457 |
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| Symbol | |
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| ID | 5105453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 410146 |
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| End bp | 411330 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506363 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190558 |
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| Protein GI | 146303242 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATCTA ATTTCATAGG CGCATATCTC TCGTGGGTGA TGGACTCTTA CGATCTCGGG
GCAGTGGTGA TAACGGCAAC CATCCTAGAG AAGGTATTTT ACCCCACACT GGGTTTGCTT
GGTGCAGTTT TACCCATTAT TTTTACAGTG GTCACGAGAC CCCTAGGCGG TTTCCTTTTC
GGGTTTTTCG CTGACCTTCA GGGGAGAAAG AAGGCCCTCA TTATCACGGT CCTAGGTTAT
TCCCTCTCCA TAGGTCTCAC GGGATTGGTA CCACCCTACG CTCAGATTGG CATACTGGCC
CCTGTCACAG TTTCCCTGCT GAGGGTAATT CAGGGGATTT TCATTGGCGG TGACGTGTCG
AGCTCATTCA CCCTAGCCAT GGAGAGCGTA TCAAGGTGGA GGGGGCTTCT TTCTGGCGTC
ATGCAGTCAG GTACTCTACT AGGTTTCGTG ATCGTAGACT TACTTTTCAC ATCCCTAGCA
AAGACGCCTG GTTTCTTCGT CACAGGTTGG AGGTATATCT TCTTCATAGG TGTAATCCCT
GCAGTTTTGG CCCTCCTGAT ACGCGCCAAG GTTACCGAAC CCAAGATATA CGTGGAAGCA
CAAAAGGAAT ATCCAATTAA GGGTCTATCT CCGTTGTGGC AAACTATCCT GGTTATGATA
GGTTTCTGGG TAATGATATA CGCCGGACCA CAGTTCATAC CCGTGTATCT GGGACAGGTT
CTTCACCTAT CTCCGCAGGT GTACGGTTTC CTGGCGTTGA TCATGAACGT TGTTGGCATA
CCTGCAATGG TACTCTCTGG CCTCCTCTCT GACTTCGTGG GAAGGAAAGT CATGGGCATT
GTGGGGGTAG TTGTGGGGTT ACTCACGGCT TCATGGTTCT ACCTTGCAGG GTCTCCCACA
TTATTGTCCA TGGTGCTTTT CGGCTTTGGA ATGAACCTTG CTTCAGCCAT ATCTCCCAGC
TACCTGGCTG AGAGGTTTAA GACGTTTAGT AGGGCCACGG GAGTGGGCTT CTCTTACAAC
GGAGCCTTCA TAGTTGCTGG TTTTACTCAA CTGTTTATTT CTCAGCTTTC CACGGTGACC
TCAGTATCAC ATTCGGCAGT GATTGTTCTT GGTCTAGGGG CGATAATAGC TGGGATTGGT
CTAGCAGTAG GTCCAGAAAC CTTGAAGGTC TCAAATCTTA ACTAG
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| Protein sequence | MRSNFIGAYL SWVMDSYDLG AVVITATILE KVFYPTLGLL GAVLPIIFTV VTRPLGGFLF
GFFADLQGRK KALIITVLGY SLSIGLTGLV PPYAQIGILA PVTVSLLRVI QGIFIGGDVS
SSFTLAMESV SRWRGLLSGV MQSGTLLGFV IVDLLFTSLA KTPGFFVTGW RYIFFIGVIP
AVLALLIRAK VTEPKIYVEA QKEYPIKGLS PLWQTILVMI GFWVMIYAGP QFIPVYLGQV
LHLSPQVYGF LALIMNVVGI PAMVLSGLLS DFVGRKVMGI VGVVVGLLTA SWFYLAGSPT
LLSMVLFGFG MNLASAISPS YLAERFKTFS RATGVGFSYN GAFIVAGFTQ LFISQLSTVT
SVSHSAVIVL GLGAIIAGIG LAVGPETLKV SNLN
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