Gene Msed_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0452 
Symbol 
ID5105448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp406065 
End bp406862 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content48% 
IMG OID640506358 
Productaldo/keto reductase 
Protein accessionYP_001190553 
Protein GI146303237 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGT GTGATAAGAA AGTATCAAAG ATAGGATTTG GCACGTGGAA AATTGGAGGA 
GGTTACTGGT CCGCCGACAG GACCCGTGAC CCTCAATGGA TCGAGTTAAT TCGTTACGTG
TACGAAAAGG GAATCAACCT ATTTGATACG GCCGAAATGT ATGGTGGAGG ACATACCGAG
GAACTTGTAG GTCAGGCGCT GAGGAATTAC GATCAGGAGG ATTTCACCAT TGTGACCAAG
GTCTGGAATA ATCACCTCTC CCACGATGAT GTGATAAAAT CTGCAAAGGC AAGTCTTAGA
AGGCTTGGCC TAAAATCCAT CGATGTTTAC CTGATTCATT GGCCATCTCC GAGCGTCCCG
CTCAGGGAGA CCATAAGGGC CATGGAGAAG CTGGTTGATG AGGGGGTTGT GAGGTGTATC
GGAGTCAGCA ACTTTGACGT TGCCCTTGTA CAGGAAGCTA TGGAGGTAAC AGCCAAGTAT
CAGATTGAGG CGAACGAAAT AGAGTACAGC TACATACATA GGGATCCAGA GAACCAACTT
ATTCCTTTCC TGGAGAAAAA CAACATTAAG GTTATAGCCT ATTCCCCCTT GGGTAGGGGA
GAGATCTCTA GGGAGCCTAA GCTAGAGGAG GTTGCGAAAA GGTACGGGGT TACCCCCATT
CAAGTGGGTC TGAACTACGT TGCCAGAAGA GCTATACCCA TTCCAAAGGC ATCCACTAAG
GCCCATGTGG ATGAGCTCGC TAAGGTTCTA GAATGGGACC TGAGAGAGGA GGACTACCTC
TACCTATCCA GGTCGTGA
 
Protein sequence
MNLCDKKVSK IGFGTWKIGG GYWSADRTRD PQWIELIRYV YEKGINLFDT AEMYGGGHTE 
ELVGQALRNY DQEDFTIVTK VWNNHLSHDD VIKSAKASLR RLGLKSIDVY LIHWPSPSVP
LRETIRAMEK LVDEGVVRCI GVSNFDVALV QEAMEVTAKY QIEANEIEYS YIHRDPENQL
IPFLEKNNIK VIAYSPLGRG EISREPKLEE VAKRYGVTPI QVGLNYVARR AIPIPKASTK
AHVDELAKVL EWDLREEDYL YLSRS