Gene Msed_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0449 
Symbol 
ID5105445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp403616 
End bp404374 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID640506355 
Productextradiol ring-cleavage dioxygenase III subunit B 
Protein accessionYP_001190550 
Protein GI146303234 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGCC TTTTCGTATC CCATGGATCT CCAACCATTC TAGTGGAGGA CATACCTTGG 
AAGAAGTTGA TGAGGGAAGT GGGGGAGAAG ATTAGGAGTG AGGTGAACCC CGAGACGGTG
GTCGTGATTA GCCCTCACTT TATATCGTGG AGTGGAAAAC ATCTGGTTGA GGTTCAGGAG
AAGCTTGAAT GTATCCAGGA TTATTACGGA TTTCCAGACG AACTTTACAA GTTCTGTTAC
TCAGCAGATA ATGACGTGGA GTTAGCAAGG CAAATAGTCA GTGCGGGAAA GAAAGCTGGA
CTTGAGGTTG AGGAAGATTC GTCCTGGGGA CTGGATCACG GAGCGTGGAT ACCCCTGAGC
TACATGTTTC CCGGCCTGAG GGTTGTGAGT ATCTCAATCA CAGACGGAAC ACCTCAGGAA
CACTATAAGT TGGGAGAGGT AATAGCTCAA GCATCCTCAG GGAGGAGAGT CCTAATCTTG
GGAACCGGAT CACCTACACA CCGGCTTGAT GGCTTATATC TGGGGATTAA ACCTAAACAA
TCAAGATTCG ACCAGGTTTT AATGGGCCTG CTAAAGGAAG GAAAGTTCGA CGAGATAATG
GAGTTGCCAA AGACGAAAAT GTGGGTGGAG GCACAGCCCG AGGGACTACT CAATCCCCTA
TACACCGTGC TAGGTTTCGT GAAGCCGAGA AAGGCTGAGA TACTTGGATA CGACGTCCCT
TGGGGAGGAG TTAGCATGCT TGCGGTAAGA TTCGAGTGA
 
Protein sequence
MIGLFVSHGS PTILVEDIPW KKLMREVGEK IRSEVNPETV VVISPHFISW SGKHLVEVQE 
KLECIQDYYG FPDELYKFCY SADNDVELAR QIVSAGKKAG LEVEEDSSWG LDHGAWIPLS
YMFPGLRVVS ISITDGTPQE HYKLGEVIAQ ASSGRRVLIL GTGSPTHRLD GLYLGIKPKQ
SRFDQVLMGL LKEGKFDEIM ELPKTKMWVE AQPEGLLNPL YTVLGFVKPR KAEILGYDVP
WGGVSMLAVR FE