Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0449 |
Symbol | |
ID | 5105445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 403616 |
End bp | 404374 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640506355 |
Product | extradiol ring-cleavage dioxygenase III subunit B |
Protein accession | YP_001190550 |
Protein GI | 146303234 |
COG category | [S] Function unknown |
COG ID | [COG3384] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGCC TTTTCGTATC CCATGGATCT CCAACCATTC TAGTGGAGGA CATACCTTGG AAGAAGTTGA TGAGGGAAGT GGGGGAGAAG ATTAGGAGTG AGGTGAACCC CGAGACGGTG GTCGTGATTA GCCCTCACTT TATATCGTGG AGTGGAAAAC ATCTGGTTGA GGTTCAGGAG AAGCTTGAAT GTATCCAGGA TTATTACGGA TTTCCAGACG AACTTTACAA GTTCTGTTAC TCAGCAGATA ATGACGTGGA GTTAGCAAGG CAAATAGTCA GTGCGGGAAA GAAAGCTGGA CTTGAGGTTG AGGAAGATTC GTCCTGGGGA CTGGATCACG GAGCGTGGAT ACCCCTGAGC TACATGTTTC CCGGCCTGAG GGTTGTGAGT ATCTCAATCA CAGACGGAAC ACCTCAGGAA CACTATAAGT TGGGAGAGGT AATAGCTCAA GCATCCTCAG GGAGGAGAGT CCTAATCTTG GGAACCGGAT CACCTACACA CCGGCTTGAT GGCTTATATC TGGGGATTAA ACCTAAACAA TCAAGATTCG ACCAGGTTTT AATGGGCCTG CTAAAGGAAG GAAAGTTCGA CGAGATAATG GAGTTGCCAA AGACGAAAAT GTGGGTGGAG GCACAGCCCG AGGGACTACT CAATCCCCTA TACACCGTGC TAGGTTTCGT GAAGCCGAGA AAGGCTGAGA TACTTGGATA CGACGTCCCT TGGGGAGGAG TTAGCATGCT TGCGGTAAGA TTCGAGTGA
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Protein sequence | MIGLFVSHGS PTILVEDIPW KKLMREVGEK IRSEVNPETV VVISPHFISW SGKHLVEVQE KLECIQDYYG FPDELYKFCY SADNDVELAR QIVSAGKKAG LEVEEDSSWG LDHGAWIPLS YMFPGLRVVS ISITDGTPQE HYKLGEVIAQ ASSGRRVLIL GTGSPTHRLD GLYLGIKPKQ SRFDQVLMGL LKEGKFDEIM ELPKTKMWVE AQPEGLLNPL YTVLGFVKPR KAEILGYDVP WGGVSMLAVR FE
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