| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0446 |
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| Symbol | |
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| ID | 5105442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 401262 |
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| End bp | 402203 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506352 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001190547 |
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| Protein GI | 146303231 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAGG GAAAAAGCTT AAGGGTGTAC TTCAAGTCCA GGGATGTCCT AGTTAAGGCC
CTTGATGGGG TAAACGTTAG CGTGAAGGAT AAGGAGATTG TGGGCATAGT TGGTGAGTCT
GGAAGCGGTA AAACTACCCT GGGAAGGACG ATCCTTAACC TACAGAGACC GGACTCAGGA
GAAGTACTCT GGAATGGAAA GAACGTGTTC AAGTTAAAGG GTAAAGAGGA GAAGGAGTTC
AGAAGACAAA ATCAAATCAT CTACCAAAAC CCGTATGAGG CGGTGGACAT TAGACTGAAG
GTTTACGACA TAGTCGCGGA GGGTCTTAGG GTTCACAACA TTCCCAAGAA TAGAGAGGAG
GAGAGGAAGA TAGTCTTGGA TACCTTGAGA GACGTTGGCC TTACGCCTGA GGAGGAATAT
GCGAAATCGC TTCCCAATCA GCTCTCTGGT GGACAGTTAC AAAGGGTAGC TATAGCCAGG
GCTCTGGTCC TTAACCCTTC CTTCATGGTC GCAGACGAAC CGGTGTCCAT GCTAGATATG
TCCATAAGGG CCGGAGTTCT GGACATTTTT AAGCGTCTCA GAGATGAGAG GGGGATAAGT
ATAATGATGA TTACCCACGA CATCTCAACC CTGGGATACG TAGCGGACAG GATATACGTA
ATGTATCAGG GGAAGGTTAT AGAACATGGT TCCACGGATG CCGTTCTAGA TAAACCCCTT
CATCCCTACA CTCAGGGCTT AATCTCAGCC GTTCCAATTC CCGACCCATC AGGTAGGGCA
AGTCTGTTCT CCGTGAAGGT GAAGGAGGAA ACTGAGCCCT ATAACGGGAA AGGATGCAAA
TACTATCCGA AATGTCCCTT TGCCATGGCC TCCTGCAGGG AAAAAGAACC AGAATTATCG
GGTGTATCCA GTGACCACTA CGTCGCATGC TTCCTATACT GA
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| Protein sequence | MIEGKSLRVY FKSRDVLVKA LDGVNVSVKD KEIVGIVGES GSGKTTLGRT ILNLQRPDSG
EVLWNGKNVF KLKGKEEKEF RRQNQIIYQN PYEAVDIRLK VYDIVAEGLR VHNIPKNREE
ERKIVLDTLR DVGLTPEEEY AKSLPNQLSG GQLQRVAIAR ALVLNPSFMV ADEPVSMLDM
SIRAGVLDIF KRLRDERGIS IMMITHDIST LGYVADRIYV MYQGKVIEHG STDAVLDKPL
HPYTQGLISA VPIPDPSGRA SLFSVKVKEE TEPYNGKGCK YYPKCPFAMA SCREKEPELS
GVSSDHYVAC FLY
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