Gene Msed_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0437 
Symbol 
ID5105554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp388158 
End bp389291 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content46% 
IMG OID640506343 
Productmajor facilitator transporter 
Protein accessionYP_001190538 
Protein GI146303222 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGGG ACGAACTATT CCTAATCCTA TCCACTTCCT CCCTTGGGGT TCTGTGGGGT 
GCTAACTCCC TAGCCACCTC ACTTTACCTG AGGAGTCTAG GTTACGATCC GCTGTTCATA
GGTACTATCC TAGGTGTCGG GATAATCACA GGGTCTGGAG TGTCTGTCCT GGTATCAATA
TTGGCTGACG CGTATGGGAG AAAGAGGTTT ATCTTGATGA ACAGGATTCT CTCTATTCTA
GGAATTTTTG CATTTGGGAT TCTGAGGATC CCCTTTGGTT ACCTCATCGT AAATCAGTTC
GGAGGAAGCC TAACCACTTC CTTTCTTGCC GACAAGAGTA AGAACTTGGA TAGGTCCCTC
AGTCTTCAGA CTTCAATATC TCAGATATTC GTGGTTTTGG GAAATATCTT GGGAGGATTA
CTCCAGTTCA GGGTCCTATA CGCTCTCGAG ATAGTTACGT TGTTGATATC CTTGGTTCTA
GTATTATCAG TAAGGGAAAA CTACGAGAAA AGGGAAGTGT CGTTCGGACT AAAATCTGCA
GGGGTGGTTG GTAAATTTGC CGTGGACTCT CTCATTGGTT TAGGTGCAGG TGCCCTCCTG
CCCCTGATAT CACTCTGGTT CTCCCTTGCT TTCAAGGTGT CGAGGCTTCT ATTAACGCCC
GTGTTTATAG CCTCTCAGGT GTCGCTGTCA CTTGGAACCT TGGTCGCCCC TAAGCTTGGA
GAGAAATTTG GAAAGATAAA GGCTATAGTT TATACTCACG TAATCGCCAT TATTCTCCTC
TTTCTTATTC CCTTTTCACC TACCTTCCTC ATAGCCTCAG CACTCTACGT CATGAGGAAC
GTGTCCATGA ACATGACCTC GCCCCTATTT TCAAGTCTAG TTCTACAACT GGTTCCTAGG
GAGGAGAGGG GAAGAGCACA GACCTTGATT CAGCTTATGG ACTCTATACC TCGCTCGTTA
GGACCAACCC TAGGAGGATA TTTTCTTTCC TTAGGGGTTT TGTGGGTACC CTTCGTGTTC
ACAGGTACTC TCTACAGCGT TTCCACAGGC CTGTTCTACT ACATGTTTAG GGAATCTAAC
CTACCACCCA GAGTTAATCC CTCTAATTCT CCTGACAAGG TAAACAATGG CTGA
 
Protein sequence
MNRDELFLIL STSSLGVLWG ANSLATSLYL RSLGYDPLFI GTILGVGIIT GSGVSVLVSI 
LADAYGRKRF ILMNRILSIL GIFAFGILRI PFGYLIVNQF GGSLTTSFLA DKSKNLDRSL
SLQTSISQIF VVLGNILGGL LQFRVLYALE IVTLLISLVL VLSVRENYEK REVSFGLKSA
GVVGKFAVDS LIGLGAGALL PLISLWFSLA FKVSRLLLTP VFIASQVSLS LGTLVAPKLG
EKFGKIKAIV YTHVIAIILL FLIPFSPTFL IASALYVMRN VSMNMTSPLF SSLVLQLVPR
EERGRAQTLI QLMDSIPRSL GPTLGGYFLS LGVLWVPFVF TGTLYSVSTG LFYYMFRESN
LPPRVNPSNS PDKVNNG