| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0409 |
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| Symbol | |
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| ID | 5105526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 361763 |
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| End bp | 363343 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506315 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001190510 |
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| Protein GI | 146303194 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATC AAAAGGCAGT TCCAAGATTA AGAAGAGGAG TAGTTGGCAC GCTTGAGGCT
GTAGCTCAGG AAATAGCTGC AATGGCGCCC GCGTGTGATA CTGTCGCCTT CATTACCTCA
GCTGCGGCCT TTGCGTTCGT GCTAACTCCC TTCGCGTTTT TACTAGCGAT GCTTACCATG
TTCATAGAAG TAAACACGTT ATATCATCTG TCAAAGAGAC ACGCAAGTGC AGGTGGATAC
TATGGTTACG TGGCCACTGC CTTAGGTCCC TTTACAGCAA TAGTAACTGG TCTCATGTAT
CCGGTATATC AAATAGCTAG TACTGCAGCT ATTCCTGTTT ACGTTGCAGG CGTGGTACTC
CCAGGGGTAT TGAATTACTT CTTTGGGATC AGTTTGCCCG GATGGATCTG GATCCCCTTC
ATCTTAGGCT TCATTCTGGT TCCAATTGGG CTCGCCATTG TGGGGATAAG GCCTCAAATG
AAGTACATCA GATATGCTGC TATGACGGAA ATAGCGTTTC TGGCTATAAC CTCGTTATAC
ATAATCGTAA TGTCCCCTGA CAATACCCTT AACGTATTCA ACCCGTTTGC CTGGAACTCG
GTTTACGGAG CTCAATTCGC ACCCCTTGGG GGTCCAATTG CTGGATTAGG TCTTGGAATG
ATATTCGGGT TGACAAGCTT CATTGGATAC GGAGGCTCAG CACCCTTAGG TGATGAGGTC
AAGAATAGTA AGGCGATTAC AAAGGCACTG ATGCTTGGGG TAAGCATTGT GGGAATAGTG
CTCACCGAGG TAAGTTACGC TTTAACGGTG GGATGGGGAG TGAATAACAT GACGAGTTTT
GCCAACAGTA GTATACCTGG GATAATTGTG TACGCCCATT TCATGGGAAT TGTGGGTGGA
CTCATGCTTG CCCTATTCGC ATTCAATTCA GCTTTCTCGG ATAGCGTTGC GATGCAATCC
AATGCAGGAA GGGTCTACTT TGCCATGGGA AGAGACGGAA TACTCCCCAA GTTCTTTGCC
TATGTTCACG AGAAATGGAT AACTCCTAGT AAGGCACTTC TCTTTGTGGG GATTGCCTCG
AGTATTACAG CAGTGCTATC GGGTTTCGTG ATCGGGTGGT TATCAGGAGT TTCACCTTTG
CAAATGTTTA CGTTAAGTGC TACTTCTCAA CAGGTCTCTT TGGCGTTAAG TAACGTTTTT
GATTTCCTCA CTACCATTGC ACTTGTGGGA TTTATTGTGG CACATTTTGC GAACAACACT
GCAGTAATGG TAATGTTCTA CAGGCTCAAG GAGAAACACA CAGGGGTTAA CAGGATCCTT
CATCCCGTGA TGCACTACCT TTTACCAGCA GTAGCAACAG CCATATTTGC CTTCGTTCTC
TACGAGTCCA TATGGCCTCC AGTATTTCCA GTAACGCAAG CGGTAATCGT GGGCGTAGCC
TTCTTGGTAT TTTCAATATT TTACACTCTC AGGATAAAGA GAAATAACCC GAAGGCCTAC
AAGAACGCAG GGATCACGGT GAATATTGTG GAGGAAGAGA AGTTGGAGAA GATGAGCAAA
GCTGAAAAAG ATCCAAATTA A
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| Protein sequence | MSNQKAVPRL RRGVVGTLEA VAQEIAAMAP ACDTVAFITS AAAFAFVLTP FAFLLAMLTM
FIEVNTLYHL SKRHASAGGY YGYVATALGP FTAIVTGLMY PVYQIASTAA IPVYVAGVVL
PGVLNYFFGI SLPGWIWIPF ILGFILVPIG LAIVGIRPQM KYIRYAAMTE IAFLAITSLY
IIVMSPDNTL NVFNPFAWNS VYGAQFAPLG GPIAGLGLGM IFGLTSFIGY GGSAPLGDEV
KNSKAITKAL MLGVSIVGIV LTEVSYALTV GWGVNNMTSF ANSSIPGIIV YAHFMGIVGG
LMLALFAFNS AFSDSVAMQS NAGRVYFAMG RDGILPKFFA YVHEKWITPS KALLFVGIAS
SITAVLSGFV IGWLSGVSPL QMFTLSATSQ QVSLALSNVF DFLTTIALVG FIVAHFANNT
AVMVMFYRLK EKHTGVNRIL HPVMHYLLPA VATAIFAFVL YESIWPPVFP VTQAVIVGVA
FLVFSIFYTL RIKRNNPKAY KNAGITVNIV EEEKLEKMSK AEKDPN
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