| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0408 |
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| Symbol | |
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| ID | 5105525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 360397 |
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| End bp | 361629 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506314 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001190509 |
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| Protein GI | 146303193 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC TTACCTTCTG GCAGGCCCTC TTCATAGGCT TAGGTAACAT AATTGGGGCA
GGAATATTCG TCATGGCGGG CGCCACCATA TCCGCTGCGG GCCCTGGGGC AATTCTAGCC
TTCGTCATCA CGGCAATTTA TGCCATGACC GTGGGCCTCA ATAGCGCCGA ACTATCCTCG
ATTTACACTG ATGTGGAAGG TGGAGTTTAC AGCTTTACCC TAAAGACCTT AGGTGGGATG
AGTGGTTTTC TCGTGGGATG GTTTAGGGTA ATCGCATATT CTATTAGCGG AGCTGCGACG
GCACTGGGTT TCTCGGGATA CATGACCCAA CTTGGTATTC CGTCAATTTT GTATTACCCT
ATGGCTGTGA TCCTTATCGT GGTATTACTT TTTCTCAATT ATTTGGGATT GAGACTCGTG
GCCAACGTCG AAACGATTCT CGTTCTCGTG AACCTCTTTA GTCTTATCAT GTTTACGGTA
TCTACTCTCG TCATAGCAGG AGTCAGAGTT CACAACTTCA CGCCCTTTCT TCCTCACGGC
GTGACGGGGT TATTTCTGGC CTCAAACTTA GCATTTTTCG CTTACTCTGG ATTTAACACC
ATAGCGACCC TCACTCCCTC AACCGAGAAC GGCGAGAAGG TGATTCCTAG AGCTATCGTG
TGGTCTCTGG TCATAACATC CCTCATTTAC ATTTCGGTCA TCTTTGCCAT GGTGGATGCA
GTACCTTACA CATACTACGG GCTATCCTCG GCGCCGCTCT CCCTCACCCT TAGTTCCATA
CATGCGCCGT CCGTGATATA TTACGTAATT GGGGCCTCGG CCTTAATTGC AACCGTAAGC
GTTACACTCT CAATAATTGT GGCGGGGCAA AGGACTCTCG ATCAATTGTC CAAGGACTTT
CAACTTCCAG TGAGACATCC TCTCATTCTA GTGGGGGCAA TTATGGTTGT CTCACTATTC
CTAGGAAACG TGGAGAGCAT AGCTCTAGCC AGTAATTTCG GAATAGTATT CTCCTACATG
TTAACAGGAC TTGAGGTAAT GATTTCCAGG CACAGAGGTC TTCGCGGGGT TTTCAGATCG
CCGGGCTATC CCATACTTCA GTTGATATCC ACAGCCCTAT CTGCGGTGTT CCTTATCTCA
CTGGGAATTC AGTCCCTTGA GATAGGAGTG GTGACCCTTT TCCTTGGAAT ACTAGTCTAC
GAGGCCCTAA GGGAGACCAG GCTAAGAAAA TAG
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| Protein sequence | MKKLTFWQAL FIGLGNIIGA GIFVMAGATI SAAGPGAILA FVITAIYAMT VGLNSAELSS
IYTDVEGGVY SFTLKTLGGM SGFLVGWFRV IAYSISGAAT ALGFSGYMTQ LGIPSILYYP
MAVILIVVLL FLNYLGLRLV ANVETILVLV NLFSLIMFTV STLVIAGVRV HNFTPFLPHG
VTGLFLASNL AFFAYSGFNT IATLTPSTEN GEKVIPRAIV WSLVITSLIY ISVIFAMVDA
VPYTYYGLSS APLSLTLSSI HAPSVIYYVI GASALIATVS VTLSIIVAGQ RTLDQLSKDF
QLPVRHPLIL VGAIMVVSLF LGNVESIALA SNFGIVFSYM LTGLEVMISR HRGLRGVFRS
PGYPILQLIS TALSAVFLIS LGIQSLEIGV VTLFLGILVY EALRETRLRK
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