| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0406 |
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| Symbol | |
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| ID | 5105523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 357158 |
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| End bp | 358852 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506312 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001190507 |
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| Protein GI | 146303191 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTACCG TTCAAGACTT TTTCCGGAAG TTCATAGAAT TTCAGAACTC TCCCAATGAG
AAGTCCCTTC AGGAGATAGT TAAACTCGTT GGTCAACTAG ACCTAAGGAG GTTTAACTGG
GTAAGAGACG TCTTTGAGGA CATTCACGTT AAGGAGAGGG GGAGTAAGAC GGCCCTGATC
TGGAGGGACA TAAACACAGG CGAGGAGGCA AAACTGAGCT ATCATGAGCT GTCCTTGATG
TCCAACAGAG TGCTGAGCAC GTTGAGGAAA CACGGCCTGA AGAAGGGAGA TGTGGTCTAT
CTAATGACCA AGGTTCACCC CATGCACTGG GCAGTGTTCT TGGCCGTAAT TAAGGGAGGT
TTCGTGATGG TTCCAAGTGC AACCAACCTA ACTGTAGCAG AGATGAAGTA CAGGTTCTCG
GACCTGAAGC CCAGCGCCAT CATCTCTGAC TCATTGAGGG CCTCAGTGAT GGAGGAGGCA
CTAGGTTCCC TCAAGGTCGA GAAATTCCTC ATCGATGGGA AGAGGGAGAC CTGGAATTCC
CTGGAGGATG AATCCAGTAA CGCGGAACCG GAGGATACCA GGGGTGAAGA CGTGATAATA
AACTACTTCA CCTCAGGGAC CACTGGGATG CCCAAGAGGG TTATCCACAC AGCAGTGTCC
TACCCCGTGG GATCGATCAC CACAGCCTCC ATAGTCGGCG TCAGGGAGAG CGATCTCCAC
TTAAACCTAA GTGCCACAGG ATGGGCCAAG TTCGCGTGGA GCTCATTCTT CTCTCCCCTT
CTAGTAGGGG CAACCGTGGT GGGAATAAAT TATGAGGGAA AGCTGGACAC TAGAAGGTAT
CTAGGCGAGG TCGAGAACCT GGGAGTGACC AGCTTTTGTG CCCCTCCCAC CGCCTGGAGG
CAATTCATTA CCCTCGACCT TGATCAATTC AGGTTTGAGA GATTAAGGTC CGTAGTCAGT
GCAGGGGAAC CCCTCAACCC CGAGGTCATA AAGATCTGGA AGGACAAGTT CAACCTTACC
ATAAGGGACT TTTACGGCCA GACTGAGACC ACCGCAATGG TGGGGAACTT CCCCTTCCTC
AAGGTGAAAC CTGGGTCCAT GGGCAAGCCA CATCCCCTCT ACGACATAAG GCTTCTTGAC
GATGAAGGCA AGGAGATTAC GAAACCCTAT GAGGTGGGTC ATATAACCGT GAAGTTGAAC
CCTAGGCCCA TTGGTCTTTT CCTGGGTTAT AGTGACGAGA AAAAGAACAT GGAGTCCTTT
AGGGAAGGAT ATTACTACAC GGGTGACAAG GCGTATTTCG ACGAGGAGGG ATACTTTTAC
TTCGTGGGAA GGGGAGATGA CGTAATAAAG ACCTCAGACT ACAGGGTGGG ACCATTTGAG
GTGGAGAGTG CTCTCTTGGA ACATCCCGCA GTTGCCGAGG CCGCAGTCGT TGGAGTCCCT
GATACTGTGA GGTGGCAATT GGTGAAGGCC TACATAGTCC TGAAGAAGGG GTACATGCCT
AGCAAGGAGC TGGCCGAGGA AATAAGGGAG AAGATGAAGA CCCTTCTCTC GCCTTACAAG
GTACCTAGGA TTATCGAGTT TGTGGATGAA CTTCCGAAGA CCATTAGCGG TAAGATCAGG
AGGGTTGAAC TCAGGAAGAG GGAGGAGGAA AAGAGGAAGA AGGGAGAGGT GGGACAGAAC
GAGTACGTCT TCTGA
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| Protein sequence | MVTVQDFFRK FIEFQNSPNE KSLQEIVKLV GQLDLRRFNW VRDVFEDIHV KERGSKTALI
WRDINTGEEA KLSYHELSLM SNRVLSTLRK HGLKKGDVVY LMTKVHPMHW AVFLAVIKGG
FVMVPSATNL TVAEMKYRFS DLKPSAIISD SLRASVMEEA LGSLKVEKFL IDGKRETWNS
LEDESSNAEP EDTRGEDVII NYFTSGTTGM PKRVIHTAVS YPVGSITTAS IVGVRESDLH
LNLSATGWAK FAWSSFFSPL LVGATVVGIN YEGKLDTRRY LGEVENLGVT SFCAPPTAWR
QFITLDLDQF RFERLRSVVS AGEPLNPEVI KIWKDKFNLT IRDFYGQTET TAMVGNFPFL
KVKPGSMGKP HPLYDIRLLD DEGKEITKPY EVGHITVKLN PRPIGLFLGY SDEKKNMESF
REGYYYTGDK AYFDEEGYFY FVGRGDDVIK TSDYRVGPFE VESALLEHPA VAEAAVVGVP
DTVRWQLVKA YIVLKKGYMP SKELAEEIRE KMKTLLSPYK VPRIIEFVDE LPKTISGKIR
RVELRKREEE KRKKGEVGQN EYVF
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