| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0403 |
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| Symbol | |
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| ID | 5105520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 354409 |
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| End bp | 355788 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506309 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_001190504 |
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| Protein GI | 146303188 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGA TAGAGGATGA GCTCGAATCT ATTGCACGCA GATTTCCCTT CAGATACGTC
GAGGTTAGGC ATCATCAAAT TTCGTCAAGA GTAATTTCCC TAATGAACGG TGAGTTGCTC
GGGGTTTACG ATGAGATTGA GGGAGGATAC TCCGTTAGAT ACTTCAATGA TGCCCTCTTT
TTCGTTTCAT CACAGAACCC GAACGAATTT GAGCCAAGTC CTGAAAGGGT CATGGGATGG
TCAAGTGACT TTTTGGATAG TGAACCCGAG AATGGAACCT ATCAGGTAGA TGAGAAAACT
CCCCTCTCCT CAATTTCCCT GGAGGAGAAG ATTGCCCTCC TGAAGGACAT CTCCAAGGAG
GTGTTATCCC AGAGGATAGA GTCAAAGCTT CACAACTTCG TTCTGACCTA TTCCGAGAGC
GTAGAGGAGA AGGAGATCCT AATTAATGGT TCCAGGATTG TAGGCCGTGT CCCTAGAATC
CTCGTCTCAT ACAACCTAGT TATGTCTGGG AACGGTAGAA CCATTACGGC GTGGCATGAG
TTGGGAGAGA GTGGAGGGCT GGAGAGATTG AAGGAACTCA AGGTGGGAAG TCATCTAGTG
GAGAGGGTCA AGTCTCTCGA TCTTATTCTC CAGAGAGGGA AAGGAATAAC CACAGGGAGG
AGGGACGTGG TTCTTAGCCC CATCCTAAGC GGGATTATGG CTCATGAGTC AGTGGGACAT
CCCTTTGAGG CTGACCGTGT TCTAGGAAGG GAGTTTGCGC AGGCTGGAAC CAGTTACCTA
GCTATTATGA ACTCAAGGAA AATTGGTAAC CCTGCGGTGA ATGTGGCAGA CGATCCAACA
ATACAGAATA GCATGGGCTA TTTCCTTGTA GATGACGAGG GAGTCAAGGC CAGGAGGAAG
CTCCTAATAA GGGAAGGTGA GGTAAACGAG CTATTGCAGA ATAGATTCAC AGCTAAAAGG
GGGAACGTTC CCAACAACGG ATCCGCTAGG GCGTCTAGTT TTGATAGGGA ACCGCTGATT
AGGATGTCTA ACACATTTTT CGTTCCAGGG GACATGAACT TCAGGGAACT AGTCGAGGAT
GTGAAAGAGG GGATATTCTT CAAGACCTAT ATGGAGTGGA ACATAGACGA CATGAGGATG
GGTCAGAGAT ACATTGGGCT TGAGGCCTAC GAGATAAAAC ATGGGGAGGT TGGGGAACCG
GTCCTTTTCC CTGTCCTTGA GGGAAAGACC ACGGAGTTCC TCTCAGCTAT TGACGGGGCA
GACGACTCGT TGGAGTTTTA CCCTGGCACT TGTGGGAAGG GGGACCCAGA CCAAGGAATA
CCAGTCTCCA TGGGTGGCCC AAACCTCAGG CTCAGGAACG TCATGGTTAA GGTGATTTAA
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| Protein sequence | MTQIEDELES IARRFPFRYV EVRHHQISSR VISLMNGELL GVYDEIEGGY SVRYFNDALF
FVSSQNPNEF EPSPERVMGW SSDFLDSEPE NGTYQVDEKT PLSSISLEEK IALLKDISKE
VLSQRIESKL HNFVLTYSES VEEKEILING SRIVGRVPRI LVSYNLVMSG NGRTITAWHE
LGESGGLERL KELKVGSHLV ERVKSLDLIL QRGKGITTGR RDVVLSPILS GIMAHESVGH
PFEADRVLGR EFAQAGTSYL AIMNSRKIGN PAVNVADDPT IQNSMGYFLV DDEGVKARRK
LLIREGEVNE LLQNRFTAKR GNVPNNGSAR ASSFDREPLI RMSNTFFVPG DMNFRELVED
VKEGIFFKTY MEWNIDDMRM GQRYIGLEAY EIKHGEVGEP VLFPVLEGKT TEFLSAIDGA
DDSLEFYPGT CGKGDPDQGI PVSMGGPNLR LRNVMVKVI
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