| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0402 |
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| Symbol | |
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| ID | 5105519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 353191 |
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| End bp | 354408 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640506308 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_001190503 |
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| Protein GI | 146303187 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGT ACGCTGTACA GGAGATATCT AGTCAGACTC TAGTCATCAA GGTTGTGGAG
AGCAAGATTG AGACCATTCA AAGGTTGAGG GACAAGTACT ACAACGTCCT CCTGAGAAAG
GGGAACAGGT TCACCGTGAC CAAGGTCAGT TCCTTAGACA AGGTGAGCCT GGATAAGGCC
CTGGATAAGC TTCCCGAGTC CAGAATAGTT CCCACGGTGT TGGAGAGGTC AGGTAAATAC
TCCTTCTCCA AGGTTGATAA GGGGGTAGTG AACCTCTTTG AGGATTCCTC ACGCCTCCTA
CCTCTCCTCA ACTCCAGGTA CCCCCTATAC GGCACTGTCA CGGCAACCGT AATTACCAAG
AGGCTCACCA CAATTCACGG ATTTGAGGGG GAGGAGAGTA GAACCTGGTT CCAGGGATAT
TTCAGGGCCA AGAATGGGGA TTATAGCGGA CAATGGGCGT TTGCCTCCTC CTTCTACGAC
GAGAGAAAGG TGAAGGACAC GATCTCCAGG GCTGAGGAGT ATGCCTCCAT CACGGGAAAA
TACGAAATCT CAGACGGAAA GTATGACGTT GTACTCTCCC CTCTGGTCAT GGGTAATCTC
ATGGCTACTG TGGCCTACTC TGCCTCAGGT TACAGTATAA TGACAGGAAA CAGCTTTCTC
TCAACCCACA AGCCAGGTGA TGTTGTGGCC AGCCAGAAAT TCACGTTGAT CGATAACCCC
AAGGGAGACG AGTTAAATTC CTGGGAATTC GACGACGAGG CGGTGCCTAC TAGGAAGACA
ACCATAGTGA ACAAGGGGGT CTACACGAGT CCCCTCCTCA ACATAGAGGT TGGGAAGATG
CTTAATCAAG ACACCACAGG AAACGCAGGT TGGGTCTACC CAAGGCCGTG GACTCTGGAG
GTCCTTCCTG GAGAGGTGTC AGAGAGCTCC CTGCTGGAGG GTAATGTGAT CCTCTTCAAC
AATAACTGGT ACACCAGGTT CCAGAACAGA GCTGAGGGAC AGTTTTCGAC CGTTGGGAGG
GATGCAGTTG TGGTAATAAG GGGAGGTAAA CCTGCAGGAG TGGCAGGAAG GGTGAGGATA
GCTGACAAAC TGGGAAAAAT AATCTCCGGA ATAAGGGAGC TTTCCAAGGA AAGATATCCT
GTAGCTTGGT GGGACGCACC CCTACCTGGG GTTTACCCAT TCGCCCTGGT CGAGGGAGTG
AACTTAACCA GAGCTTAG
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| Protein sequence | MNAYAVQEIS SQTLVIKVVE SKIETIQRLR DKYYNVLLRK GNRFTVTKVS SLDKVSLDKA
LDKLPESRIV PTVLERSGKY SFSKVDKGVV NLFEDSSRLL PLLNSRYPLY GTVTATVITK
RLTTIHGFEG EESRTWFQGY FRAKNGDYSG QWAFASSFYD ERKVKDTISR AEEYASITGK
YEISDGKYDV VLSPLVMGNL MATVAYSASG YSIMTGNSFL STHKPGDVVA SQKFTLIDNP
KGDELNSWEF DDEAVPTRKT TIVNKGVYTS PLLNIEVGKM LNQDTTGNAG WVYPRPWTLE
VLPGEVSESS LLEGNVILFN NNWYTRFQNR AEGQFSTVGR DAVVVIRGGK PAGVAGRVRI
ADKLGKIISG IRELSKERYP VAWWDAPLPG VYPFALVEGV NLTRA
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