Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0390 |
Symbol | |
ID | 5103633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 338220 |
End bp | 338783 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506296 |
Product | carbonic anhydrase |
Protein accession | YP_001190491 |
Protein GI | 146303175 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.10954 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAATCG TCATATCGTG TATGGACAGG AGATTAAACC AGTTTCTGGA GAAAAATTTT AACGATGGAA ACACGATCTT CGTGCGAAAT GCGGGGGCTA ACGTTAACTC CCTAAGAAAT ACCTTGGCAT TGCTGAAAAA AGCTGACGAG ATATTGCTAT TGCCCCATAC GGATTGCGGT GCCATGGGCG TGGTTGAGAA GGCGTTGAAG GGGGAGAAAC TCCCTGCGGA GTTAGAGCCC TTGATATCTC CCTTCAGAAA GTACTTGGGC TACACCAAGG CTCAACTGGA GAAGGTAAAC GTTGAAGTCC AGGAGAGTGC CCTCAAGGGA GCAGTGAAGG CGAAGGTCAG GTCAGAGCTC ATAAGGACCG AGGAACTGAA TGCGCCTGCA TCGAGCGATA ACGTCGCTCT GGTTATGCCT CCCTCAACCA GGAAGTACTC AGAGGTGATT TCGCCAGACA TGATGTACAG GACATACGTA ATACAGACTG ACAATGATGG CGACATAGAT GTGTTAATCG CAAAGGAGTT CCTCAAGGTT AGGGATGTAA AGAGGATTAG CTAG
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Protein sequence | MRIVISCMDR RLNQFLEKNF NDGNTIFVRN AGANVNSLRN TLALLKKADE ILLLPHTDCG AMGVVEKALK GEKLPAELEP LISPFRKYLG YTKAQLEKVN VEVQESALKG AVKAKVRSEL IRTEELNAPA SSDNVALVMP PSTRKYSEVI SPDMMYRTYV IQTDNDGDID VLIAKEFLKV RDVKRIS
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