Gene Msed_0390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0390 
Symbol 
ID5103633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp338220 
End bp338783 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID640506296 
Productcarbonic anhydrase 
Protein accessionYP_001190491 
Protein GI146303175 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.10954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATCG TCATATCGTG TATGGACAGG AGATTAAACC AGTTTCTGGA GAAAAATTTT 
AACGATGGAA ACACGATCTT CGTGCGAAAT GCGGGGGCTA ACGTTAACTC CCTAAGAAAT
ACCTTGGCAT TGCTGAAAAA AGCTGACGAG ATATTGCTAT TGCCCCATAC GGATTGCGGT
GCCATGGGCG TGGTTGAGAA GGCGTTGAAG GGGGAGAAAC TCCCTGCGGA GTTAGAGCCC
TTGATATCTC CCTTCAGAAA GTACTTGGGC TACACCAAGG CTCAACTGGA GAAGGTAAAC
GTTGAAGTCC AGGAGAGTGC CCTCAAGGGA GCAGTGAAGG CGAAGGTCAG GTCAGAGCTC
ATAAGGACCG AGGAACTGAA TGCGCCTGCA TCGAGCGATA ACGTCGCTCT GGTTATGCCT
CCCTCAACCA GGAAGTACTC AGAGGTGATT TCGCCAGACA TGATGTACAG GACATACGTA
ATACAGACTG ACAATGATGG CGACATAGAT GTGTTAATCG CAAAGGAGTT CCTCAAGGTT
AGGGATGTAA AGAGGATTAG CTAG
 
Protein sequence
MRIVISCMDR RLNQFLEKNF NDGNTIFVRN AGANVNSLRN TLALLKKADE ILLLPHTDCG 
AMGVVEKALK GEKLPAELEP LISPFRKYLG YTKAQLEKVN VEVQESALKG AVKAKVRSEL
IRTEELNAPA SSDNVALVMP PSTRKYSEVI SPDMMYRTYV IQTDNDGDID VLIAKEFLKV
RDVKRIS