Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0387 |
Symbol | |
ID | 5103630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 335222 |
End bp | 335611 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640506293 |
Product | hypothetical protein |
Protein accession | YP_001190488 |
Protein GI | 146303172 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.448785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGGGAA TTCCATTACA GTTGAGGTAT ACGGTCCCTG AGAAGGGATA TGAGAAGTTC TGGGAGGGGC TGAGGAAAAA CGAGATCTGG GCCACGAAGT GTAGAAAGTG TGGGACACTG TATTACCCCC CGCAAAGGGA TTGTACCTCG TGCTACACCT CCGAACTTGA GTGGGTGAAA CTATCCAACA GGGGAAAGCT CATGACCTAT ACCGTGGTGA AGGCGAAACC GCAAGGGTAC GAGAGTGAAG AGGATTACGT CATTGGAATA GTTAGAACTG ACGACGGAGT TGACCTGATG TGTTGGATCA AGGGAACCCC AAGGGTTAAC TCCCACGTGA ATCTAGTGAC TGATGGAAAG AGGGTTGTGG GTGAGATCCT TGATGTATGA
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Protein sequence | MEGIPLQLRY TVPEKGYEKF WEGLRKNEIW ATKCRKCGTL YYPPQRDCTS CYTSELEWVK LSNRGKLMTY TVVKAKPQGY ESEEDYVIGI VRTDDGVDLM CWIKGTPRVN SHVNLVTDGK RVVGEILDV
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