Gene Msed_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0369 
Symbol 
ID5103612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp321373 
End bp321978 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID640506275 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001190470 
Protein GI146303154 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTTA GAACATTCGT GTTGGGCCCC CTTCACACAA ACTGTTACCT TATTTGGGAT 
AAGGGAGAGG CCCTAGTAAT TGACCCTGGT GGAGATCCCT CCGAGGTCAT CGCTTTTCTG
AGAGGAAGTG GCCTGAGGCT CAAGTACATA GTTTCAACCC ACGGTCACTT TGACCATGTG
CTGGGCGTGA AACCCTTGAA GAGAATTGGG GCCAAGTTCT TGATCAACTT CAAGGATGTG
GATTTAATGC CCCTCTACTA CGACTGGAGA GAACTTCCAC CAGAGCCAGA TGACGAACTT
AAGGACGGAA CGGAGATTAG GGTAGGCGAT CTTACCTTGA TGGGAATATC CACACCGGGT
CACACCATGG GGAGTACCTC AATTCTTGTG GGGCAATCCC TGTTCACTGG GGATACCCTA
TTCAAGGGAA CCGTCGGGAG ATATGATCTT GGTGGCGATA GGGATACGCT GAGAGTTACT
CTTGAAAAGA TCAAAACCAT GAACGTTGTG GACGTGTTCC CAGGACACGG AGACAGGACC
ACATTACAGG ATGAAGTTAG ATCCAATCCC TTCCTGAATG GGGTTCTAGG TCCGGACGAC
TGGTGA
 
Protein sequence
MNLRTFVLGP LHTNCYLIWD KGEALVIDPG GDPSEVIAFL RGSGLRLKYI VSTHGHFDHV 
LGVKPLKRIG AKFLINFKDV DLMPLYYDWR ELPPEPDDEL KDGTEIRVGD LTLMGISTPG
HTMGSTSILV GQSLFTGDTL FKGTVGRYDL GGDRDTLRVT LEKIKTMNVV DVFPGHGDRT
TLQDEVRSNP FLNGVLGPDD W