Gene Msed_0366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0366 
Symbol 
ID5103609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp318368 
End bp319036 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID640506272 
Producthypothetical protein 
Protein accessionYP_001190467 
Protein GI146303151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGTGA AGGAAATTAT TTACAAGCAT ATTGTTGATG ACGAGTTTAA GCAACCGTAT 
GAAGGTGAGT ATTGGCCTTC CAAGATCTGG AATTGCCTGA GGAAGCAGTA CTATGATAGG
ACTTCGCCTG TTCTTTCTGG AATTGATTCA GCGAGGTTTA CTGTCCTGGG AGAGGCGCTT
CACGAACTCG TAGCTGAGAT ACTGAAGAAG GAGGATAGCG TGAAGGTCAC CAGTGAACTA
CCCTTGAGGA TCCCTCACCC GACCAACCAC GAAATAGTGA TCTCGGGAAG GGCTGATGAC
CTCATCGTGA TTGAATTCAC GAAGGAGAGG TACCTTGTGG AGGTTAAGAG CGTGGATAAC
CTTCAGCACA AGGTTAGGAA CGGGTACTTA CCAAGACTCG AACATAGGGC TCAACTCAAT
CTCTACATGA AGGCCTTTCC CAAGTCGAAG GGAGTTCTCC TTTACGTGGA TAGGTCCAAC
TTCGAAATGG AGGAGTTTAT CCTCGATTTC GATGAGCAAC TCTATCTGAA AACTATGGAG
AGAGCTGAAC TCCTTCATAG GGCTATCAAG GAAAGGAAAG TTCCAGAACC TGAGGCTAAG
TTAAGGGATG ATATGAGGTG GCAGTGTGAT TTTTGCCTGT ATAGGGCCAA ATGTGATAAG
GATAGTTAA
 
Protein sequence
MVVKEIIYKH IVDDEFKQPY EGEYWPSKIW NCLRKQYYDR TSPVLSGIDS ARFTVLGEAL 
HELVAEILKK EDSVKVTSEL PLRIPHPTNH EIVISGRADD LIVIEFTKER YLVEVKSVDN
LQHKVRNGYL PRLEHRAQLN LYMKAFPKSK GVLLYVDRSN FEMEEFILDF DEQLYLKTME
RAELLHRAIK ERKVPEPEAK LRDDMRWQCD FCLYRAKCDK DS