Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0366 |
Symbol | |
ID | 5103609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 318368 |
End bp | 319036 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640506272 |
Product | hypothetical protein |
Protein accession | YP_001190467 |
Protein GI | 146303151 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTTGTGA AGGAAATTAT TTACAAGCAT ATTGTTGATG ACGAGTTTAA GCAACCGTAT GAAGGTGAGT ATTGGCCTTC CAAGATCTGG AATTGCCTGA GGAAGCAGTA CTATGATAGG ACTTCGCCTG TTCTTTCTGG AATTGATTCA GCGAGGTTTA CTGTCCTGGG AGAGGCGCTT CACGAACTCG TAGCTGAGAT ACTGAAGAAG GAGGATAGCG TGAAGGTCAC CAGTGAACTA CCCTTGAGGA TCCCTCACCC GACCAACCAC GAAATAGTGA TCTCGGGAAG GGCTGATGAC CTCATCGTGA TTGAATTCAC GAAGGAGAGG TACCTTGTGG AGGTTAAGAG CGTGGATAAC CTTCAGCACA AGGTTAGGAA CGGGTACTTA CCAAGACTCG AACATAGGGC TCAACTCAAT CTCTACATGA AGGCCTTTCC CAAGTCGAAG GGAGTTCTCC TTTACGTGGA TAGGTCCAAC TTCGAAATGG AGGAGTTTAT CCTCGATTTC GATGAGCAAC TCTATCTGAA AACTATGGAG AGAGCTGAAC TCCTTCATAG GGCTATCAAG GAAAGGAAAG TTCCAGAACC TGAGGCTAAG TTAAGGGATG ATATGAGGTG GCAGTGTGAT TTTTGCCTGT ATAGGGCCAA ATGTGATAAG GATAGTTAA
|
Protein sequence | MVVKEIIYKH IVDDEFKQPY EGEYWPSKIW NCLRKQYYDR TSPVLSGIDS ARFTVLGEAL HELVAEILKK EDSVKVTSEL PLRIPHPTNH EIVISGRADD LIVIEFTKER YLVEVKSVDN LQHKVRNGYL PRLEHRAQLN LYMKAFPKSK GVLLYVDRSN FEMEEFILDF DEQLYLKTME RAELLHRAIK ERKVPEPEAK LRDDMRWQCD FCLYRAKCDK DS
|
| |