| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0361 |
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| Symbol | |
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| ID | 5103604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 314225 |
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| End bp | 315844 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640506267 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001190462 |
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| Protein GI | 146303146 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.741399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACG GTAAAGGAAT GAAAAAAGAA ATTGGATTAA CTTCACTAAT AATCATAGGC
TTAGCCTCTG CCGTAGCTAC TGCCATATTC TTTAGTCCAT TACAAATGAC GGAGGTAGCA
GGGCCAGGAA GCTTAATTGC TTGGATAATA GCTATTCTAT TCTACGTAAC TATTTCAATA
ACATACATAG AATTATCACA AACCTATGCA GAGGCGGGAG GTCCATCCAG ATATTCAATT
TATAGTCATG GAGCTGTAAC CAACTTAATT AACGCCATGG CGGATCTTCT TTGGTACTTG
TTCATTCCTC CCATAGAGGC ATTCGCCACA ATAGAGGGAC TCGACTACAT TTTCCCATCC
TTACTCGATT CCCAAGGATT TCCCACCCTT GAGGGGGCCA TTGTAGGAGT TATCCTTATG
TTTGCTTACA TTCCCTTCAA CTATTACGGA GTGAAGACCT TCTCTAGAAT CACGTCAGGA
TTTGGAACAG TAAAATACAT CATTTACATC TTGCCGGCGT TTCTCCTCCT GCTAGTCTTC
TTCAACGTCA AGAACTTCAC AGCCTATGGC TTTCTGCCCT TTGGAGTTGC CGGAATATTT
TCTTCAATGC CCTATGCCAT GTTCGCCTTT GGAGGTGCCA GAGTAATACC GGATTTCGCA
GAGGAAGTTA AGAAAAAGAC ATACTTAATT TATGCACTTA TCATAACGGT GATTGGAGAA
GGTCTAGTTT ATCTGCTCTT TGATTTCACT TTCATAGCCA ATCTAGACTG GACAAAGCTA
GGACTTACAC CTGGGAACTG GGCGTCCCTA AACAAGGTGG TGGGGAATCC CTTCATTGTT
CTAGCTAGTA CCCATCATTC CGGTCTAGGT CAGATAGCTC TTCTGCTCTT GCTTATTGGG
GGTATAGTGG GGCCTTTCCT AACGGGTTAC GTATACATGG GAGGCGGAGC TAGGGTTCTG
TTTGCTTCGG CAAGATCTGG GTTCCTTCAC GAGAAGTTTA AGGCTCTTCA TAGTAAGTAC
GCAATACCCT ATTGGGGTCT GATACTCTTT GCCATAGTGG GGGCAGTCAT AGCATTCCTT
TTCGCTCCAG TGCCTAGCAT TTACGGTCTT ATAGATGATG CAACAGTTGC AGGGTACATT
GGTTTCGCTA CCAATCCGGT TGCCATGATG GTACTGAGGA TGCAGGGAGT GACTAAGTGG
AAGATTAAAG GAGGATCTAT CATCTCCCCA ATTGCCTTTG CTGCATCCTC ACTTATCGTA
TTTTGGAGCG GATGGCCTGC GGTTCCGTAT TCAGTCATCA TTCTCGCCAT AATTACGGCC
ATATTGGGGA TAGTGGGAAA GGTAACTGAG GGACTAAAGG AGTCTACTTG GTATATTGGC
TATATAGCGT TCTTAACCTT CATGACCTAT ATAGGATCAG ATGGAGCACT CTCGTTGGTA
CCATATTTGA CCGCAACCCT AATTACTGTT ATAGTGTCTC TAGTTCTTTT CTATCCACTG
GGAATATATC AGGGATTGAG GGAGAGAAAC TATCTCTACC ACAAAGAGGC CTCTGCCCCC
GAAGAGGGAG AGGCCTCTGC CCCCGAAGAG GGACTTGAAA GCGAAGAAGG TGGAAGATAA
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| Protein sequence | MSDGKGMKKE IGLTSLIIIG LASAVATAIF FSPLQMTEVA GPGSLIAWII AILFYVTISI
TYIELSQTYA EAGGPSRYSI YSHGAVTNLI NAMADLLWYL FIPPIEAFAT IEGLDYIFPS
LLDSQGFPTL EGAIVGVILM FAYIPFNYYG VKTFSRITSG FGTVKYIIYI LPAFLLLLVF
FNVKNFTAYG FLPFGVAGIF SSMPYAMFAF GGARVIPDFA EEVKKKTYLI YALIITVIGE
GLVYLLFDFT FIANLDWTKL GLTPGNWASL NKVVGNPFIV LASTHHSGLG QIALLLLLIG
GIVGPFLTGY VYMGGGARVL FASARSGFLH EKFKALHSKY AIPYWGLILF AIVGAVIAFL
FAPVPSIYGL IDDATVAGYI GFATNPVAMM VLRMQGVTKW KIKGGSIISP IAFAASSLIV
FWSGWPAVPY SVIILAIITA ILGIVGKVTE GLKESTWYIG YIAFLTFMTY IGSDGALSLV
PYLTATLITV IVSLVLFYPL GIYQGLRERN YLYHKEASAP EEGEASAPEE GLESEEGGR
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