Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0353 |
Symbol | |
ID | 5105511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 306384 |
End bp | 307538 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640506259 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001190454 |
Protein GI | 146303138 |
COG category | [R] General function prediction only |
COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAG TTATAGTCGT AGGTGGAGGT ATAGCTGGAA CAATCGTAGC CAACAGAATG GCTAGAATGA TGCCAGAGGA GCTGGAGAGG GGAGACGCAG AGATAGTGGT CCTGGACAAG AACGAGAAAC ATACCTATCA ACCAGGCCAA GCTCTAGTTC CCTTTAACGT TCAAGATCCC ATGGAGCTAA TCAGACCGGA GAGGGAGCTG TTAGATCATA GAGTTAAGTT TCTTCACGGT CAAAAGGGAG AAGTTTCTAA GATAGACCCG GCTAACCACT CCGTTACAAC AGCTGACGGG GTTTCCCACT CCTACGACTA TCTGGTTATA GCTACTGGTT CACATCTAAG ATGGGATGAA GTACCGGGCT ATAGGGACGC CGTCTACTCC CCTTGGGAAT ACGAGAGTGC GTTAAAACTG AGGGAAGCAT TGGATCAATT TAGTGGAGGA ACAGTGGTGA TTAACGTTGC CAAGTTACCC CATAAGTGCC CCGTAGCGCC CATGGAGATT GCCTTGATGC TGGACGATTA CCTAAAGAGG AGGGGAATCA GGGACAAGAC AGAGATTATC TACACCTATC CTGTACCTGG GATATTCGGT ATCAAGACCA CAAACGACGT TATGATAAAG ATATTTCAAG AAAGAGGAAT AAAGATAATC TCTCCATTCA ATGTAACCAA CGTTAATGCG AAGGATAAGG TGATGGAATC TCAAGAGGGG GAGAAAATCA AGTTCGACCT CGCCATAGGG GTGCCACCGC ACACAGGTGC TGATGTTATA GGGAAGTCCG GCATTGGGGA CAAGAGGAAC TGGATTCCAA CCGACAAGTT CACCTTGAGA ATGAAGGATC ACTCCAACGT ATTCGTAATA GGTGATACCA CGGACATTCC AATTTCCAAG GCCGGGTCAA CTGCGGACTT TGAATCCTAC GTAATTGCAA ACAACGTTAC GAACGAGATA AGGGGTAACG GACTCAAGAA GACATATGAT GGGTCAGTGT TCTGCTACAT TGCCACGGGA CTTGACTCTG GGACCTATAT CAGATTTAAC TACGCAGCAC CTCCAGTACC TCCACCACCT TCCTACGTAC ATTGGTGGGG CAAACTAATG TACAACAAGT TGTACTGGAC AGTGACCGCC AAGGCCATAG TGTGA
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Protein sequence | MKRVIVVGGG IAGTIVANRM ARMMPEELER GDAEIVVLDK NEKHTYQPGQ ALVPFNVQDP MELIRPEREL LDHRVKFLHG QKGEVSKIDP ANHSVTTADG VSHSYDYLVI ATGSHLRWDE VPGYRDAVYS PWEYESALKL REALDQFSGG TVVINVAKLP HKCPVAPMEI ALMLDDYLKR RGIRDKTEII YTYPVPGIFG IKTTNDVMIK IFQERGIKII SPFNVTNVNA KDKVMESQEG EKIKFDLAIG VPPHTGADVI GKSGIGDKRN WIPTDKFTLR MKDHSNVFVI GDTTDIPISK AGSTADFESY VIANNVTNEI RGNGLKKTYD GSVFCYIATG LDSGTYIRFN YAAPPVPPPP SYVHWWGKLM YNKLYWTVTA KAIV
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