| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0351 |
|---|
| Symbol | |
|---|
| ID | 5105509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 305093 |
|---|
| End bp | 305995 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190452 |
|---|
| Protein GI | 146303136 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2427] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACAG AGGTAAACCT GGATAAGGTA CTTACGAAAC TAGACGAAAA GAAGATGGAG
GAACTAGCTA ACTTCCTCGA TCACGTCTCT ACGTTAAATG AGGTCCTCAC AAAGATAGGT
CAACTAAAGG ATAGCGGTGC CCTTGACGTT CTAATTAACT TCAGTTACGG GGCCAAGTCA
CTAAGGGATG CGCTCAACGA TGATGCCATA CAGAGCATAG CCGACATGCT TTCCAATCTC
ATGATAATTG CGGGTGAGAT GAAGAATAAA CAAAACGACA TTGCCCAAAT TCTTGAAAAT
GCAGACGCAT TGAAAGATGC CCTAATGAGG TTGAAGGCAT TGAGGGATAG CGGAACCCTT
GACGTTATTG TCAACATGTC CTATGCCCTG AAGTCGTTGA GGGAAGCTCT TAACGATGAT
GCCATCATGA ACCTAGGCTC TACCCTCAGT AATCTCATGG AAGTCCTTAG CTCCATGAAT
CCCAAGACTT CAGATGGACT AAAGCAGATA ATAGACAAGG CTCCAGCACT GAATGAGGTT
TTGAATAGGG TCATGGATCT AAAGAACAGC GGCACCTTAG ACGTGTTAAT AAACATGTCC
TATGCCCTGA AGTCATTGAG GGATGCGCTC AACGATGATG CCATCACAAA TCTAGGAACT
ACCCTTTCGC TGATATTTGA GTTCTTACCC AAGGGATTAG AGTTCCTAAA TAAGGCAACG
TCCCCACCCC TGAGCTCCCT GATTGAGGTT TGGTCGAGCG AAGAGGCAAG GAAGGTCCTG
GCTAACCCGG AGAACGTCAC ACTTGGAAAG CTAATAGCTA TGATGAAGGA TCCTGATATC
CAGAGGGGGC TAGGAGTAAT GATGGGCATG TTAAAGATAG TAGGCAAGAA CTTCAAGGCC
TGA
|
|---|
| Protein sequence | MATEVNLDKV LTKLDEKKME ELANFLDHVS TLNEVLTKIG QLKDSGALDV LINFSYGAKS
LRDALNDDAI QSIADMLSNL MIIAGEMKNK QNDIAQILEN ADALKDALMR LKALRDSGTL
DVIVNMSYAL KSLREALNDD AIMNLGSTLS NLMEVLSSMN PKTSDGLKQI IDKAPALNEV
LNRVMDLKNS GTLDVLINMS YALKSLRDAL NDDAITNLGT TLSLIFEFLP KGLEFLNKAT
SPPLSSLIEV WSSEEARKVL ANPENVTLGK LIAMMKDPDI QRGLGVMMGM LKIVGKNFKA
|
|---|
| |