Gene Msed_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0349 
Symbol 
ID5105507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp303099 
End bp303821 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content46% 
IMG OID640506255 
Producthypothetical protein 
Protein accessionYP_001190450 
Protein GI146303134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACCTGA GGTATGTACT GGCGTTTGCG TGGTTCTATG GTTACTCGTT CCTGAAAAGA 
GGGTACACCT ACGTTTTCAG CTACCTGATT ACCCCGCTCT CAATCCTTTT CCTAGTGTAC
GTACTTTCCA GGGGAGCTCT GCTCCAGTAC GCTGTTGTGG GAGGATTGAT CTCCGTGGTA
GCCACGAACT CTGTGGTAAG CCTTTCTGAC GTAGTCATGT TGAGGAAGGA AATGAAGTTA
CAGGATATGC TTGTGGCCAC TAGGATAGGA CCCGCCGAAT ACATGCTAGG GTTGGCAACG
GCGAATCTAA TCTTCTCGTC TGTGGGAATG ATAGTATACG TGATTCTGGG CCTAATCCTT
CACGTATTCT CCATAACTAG TGCCCTGATC AGTTTCCTGA TAGCCTGTTA CCTGAACTAC
TCCATGACAG GATTAGCGTT TATCATTGGC ACCTTTGTCC CATACACGCG TCATTCCTGG
GCTATCTCAG GCGTTCTAGG GACAGTCTTC ACAATAATAC CGCCAATATA TTATCCATAT
TCTGAATTAC ATGGAATTGT GGCCTATCTG TCCCTAGTAA TTCCCTCATC GCCTGCCTCA
GTTATTACGC AAGGAGTAAC AGGGTTAACA AACTTCAACG TAATTGCCTT GCTCCTATTC
CTTGTTGAGG GACCTCTCTT CGTACTTCTA GCCATGAAAA CATCTAGGTG GAGAGAAAAG
TGA
 
Protein sequence
MNLRYVLAFA WFYGYSFLKR GYTYVFSYLI TPLSILFLVY VLSRGALLQY AVVGGLISVV 
ATNSVVSLSD VVMLRKEMKL QDMLVATRIG PAEYMLGLAT ANLIFSSVGM IVYVILGLIL
HVFSITSALI SFLIACYLNY SMTGLAFIIG TFVPYTRHSW AISGVLGTVF TIIPPIYYPY
SELHGIVAYL SLVIPSSPAS VITQGVTGLT NFNVIALLLF LVEGPLFVLL AMKTSRWREK