Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0349 |
Symbol | |
ID | 5105507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 303099 |
End bp | 303821 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640506255 |
Product | hypothetical protein |
Protein accession | YP_001190450 |
Protein GI | 146303134 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACCTGA GGTATGTACT GGCGTTTGCG TGGTTCTATG GTTACTCGTT CCTGAAAAGA GGGTACACCT ACGTTTTCAG CTACCTGATT ACCCCGCTCT CAATCCTTTT CCTAGTGTAC GTACTTTCCA GGGGAGCTCT GCTCCAGTAC GCTGTTGTGG GAGGATTGAT CTCCGTGGTA GCCACGAACT CTGTGGTAAG CCTTTCTGAC GTAGTCATGT TGAGGAAGGA AATGAAGTTA CAGGATATGC TTGTGGCCAC TAGGATAGGA CCCGCCGAAT ACATGCTAGG GTTGGCAACG GCGAATCTAA TCTTCTCGTC TGTGGGAATG ATAGTATACG TGATTCTGGG CCTAATCCTT CACGTATTCT CCATAACTAG TGCCCTGATC AGTTTCCTGA TAGCCTGTTA CCTGAACTAC TCCATGACAG GATTAGCGTT TATCATTGGC ACCTTTGTCC CATACACGCG TCATTCCTGG GCTATCTCAG GCGTTCTAGG GACAGTCTTC ACAATAATAC CGCCAATATA TTATCCATAT TCTGAATTAC ATGGAATTGT GGCCTATCTG TCCCTAGTAA TTCCCTCATC GCCTGCCTCA GTTATTACGC AAGGAGTAAC AGGGTTAACA AACTTCAACG TAATTGCCTT GCTCCTATTC CTTGTTGAGG GACCTCTCTT CGTACTTCTA GCCATGAAAA CATCTAGGTG GAGAGAAAAG TGA
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Protein sequence | MNLRYVLAFA WFYGYSFLKR GYTYVFSYLI TPLSILFLVY VLSRGALLQY AVVGGLISVV ATNSVVSLSD VVMLRKEMKL QDMLVATRIG PAEYMLGLAT ANLIFSSVGM IVYVILGLIL HVFSITSALI SFLIACYLNY SMTGLAFIIG TFVPYTRHSW AISGVLGTVF TIIPPIYYPY SELHGIVAYL SLVIPSSPAS VITQGVTGLT NFNVIALLLF LVEGPLFVLL AMKTSRWREK
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