Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0333 |
Symbol | |
ID | 5105491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 290429 |
End bp | 291634 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640506239 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_001190434 |
Protein GI | 146303118 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.882916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTTG ATGCAGACGT TATAGTTGTG GGCGGAGGCC TCGCTGGCCT ATCAGCTGGG ATAACCGCGA ACAGGGAAGG TCTGTCCACC CTAATCCTGG AAAGAGGTGA GTACTCTGGA GCAAAGAACG TTAGCGGGGG GAGGATGTAT GTTCACGCAC TTAAGAGCCT AGTTAACCTT GAGGAGGCTC CCCTTGAGAA GCCCATCGTT AGGGAGACGT ACGAAATTAC CTGCGGGGAG AAGAGACTCA CCTTCTCTTT TTACGATCCG AACACAAGGA ATAGCTACTC GGTGTTGAGA GCTAAGTTTG ATCCATGGCT CGCAAAGAAG GCAGAGGAGG AGGGGGTTTT AGTTATGTAT GAGACCTTGG TTCATGATGC AGTGAGGGAG AATCAGGGTA TCACCGTGAG AACCAGCAGG GGAGATCTTA GGGCTAAGTT AGTGATTGAG GCAGATGGAG TGACCGCAGG CGTGTCTAGG TACCTAGGAC TGAGGAGTCT CTCCCCCGAC TCACTCATGC TGGGAGTAAA GGAAGTGATA AAGCCTGACA GCGTTCCTGA GGAGGGTGAG GCGAGGGTAC TAGTGGGGTA CCTGAACGGC CTACTTGGAG GTGGTTTCAT GTACGTGAAC AAGGACACTT TGTCGATAGG TGCCACAGTC AAGGTCAATT CCCTGCAGAA AGAGAGAGTC TTGGCCAGGG ATATAGTGGA GGATCTAAGA ACCAAACTGG GAGTTGAGGG TGAAATACTT GAGTATTCGG CTCACCTTAT CCCCTACTAT GGTTATACTA AGCTTCCCCC TCTTACCGCA CCTAACCTGC TCGTTACAGG TGACGCGGCG GGTTTCCTGA TTAATGACGG ATTTGTCATA AGGGGAATGG ATCTGGCCAT TGGGTCAGGG ATTGTGGCCG GAAGGGCTGC CAAAAAGATA CTGGATCTAG GGGATCCCTC TAACACGAAA ATTTATGAGG ATATGCTCCA GGAATCCTTC GTGATGAAGG ACCTTAAGAC AGCCAGCAGG GCTTTTCAGC TCATGAATAA CGAGAGGTTG TTCAAGGTTT ACCCAGAACT GTTCTGCAGG GTCCTTTCAA GAATGTTCAC AGTGGAGGGA GAGAGGAAGA CTCTCATGAC CGTCTTCCAA GAGGAAGTGA AGAGAGATGG TCTCACCCTG ACGCAGGTAG TGAGGGACTT GACGAAGGTG ATGTGA
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Protein sequence | MSFDADVIVV GGGLAGLSAG ITANREGLST LILERGEYSG AKNVSGGRMY VHALKSLVNL EEAPLEKPIV RETYEITCGE KRLTFSFYDP NTRNSYSVLR AKFDPWLAKK AEEEGVLVMY ETLVHDAVRE NQGITVRTSR GDLRAKLVIE ADGVTAGVSR YLGLRSLSPD SLMLGVKEVI KPDSVPEEGE ARVLVGYLNG LLGGGFMYVN KDTLSIGATV KVNSLQKERV LARDIVEDLR TKLGVEGEIL EYSAHLIPYY GYTKLPPLTA PNLLVTGDAA GFLINDGFVI RGMDLAIGSG IVAGRAAKKI LDLGDPSNTK IYEDMLQESF VMKDLKTASR AFQLMNNERL FKVYPELFCR VLSRMFTVEG ERKTLMTVFQ EEVKRDGLTL TQVVRDLTKV M
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