Gene Msed_0331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0331 
Symbol 
ID5105489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp288850 
End bp289572 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID640506237 
Productelectron transfer flavoprotein beta-subunit 
Protein accessionYP_001190432 
Protein GI146303116 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAG TCGCTTGTTT CAAAGTGGTA CCAGACGATA CGTCTGTTCG CGTTATAGGC 
GGGAAAGTCG AGACAAACGT TCCCGTCAAG ATAAGCACCT ACGATAAGAA CGCTATTGAG
GAGGCCGTTA GATTGAAGGA GAAGCTGGGA TGGAAGGCCA TAGGCGTTAC CGTTGGTAAT
ACTGACAGGA AGAGCATCAG GGATGCCCTC TCCATGGGAT TAGACGAGGT TGTGGCAATA
TCCACAGGTT ACCTAGACGT AGCAGGGACG GCCATGGCAC TTGCCGAGAC CGTGAGGGGA
ATATCACCCA AGCTTGTGTT AATGGCTGAA ACCACTACTG ACAGCAGTAC TTCTGCGCTT
CCCCCTTACC TAGCACAACT GTTGGGTTAT CCTCTCATCT CCTATGTTAG ATCTCTTACG
ATTCACGACT CAACGATCAC GGCAGAGAGG AGTGTAGGTG ACGTAGAGGT CGTGGAGGCG
CCTCTCCCAG CCGTGGTGTC TGTGACCGGG GAAATTAACA CACCTAGGAC GCCCTCAGTG
AAGCAAATAA TGGAGTCGGC GAAAAAACCT GTGAAGCAGG TTAATTTCTC GTCTCAACCC
TTAGCTGAGC TGGTTGAAGT TCAACCCTTC GTCACAACGA GGAAGAAGGT GATAATCGAG
AAACCCATGG CTGAGGCCGT GGATCAGCTC ATAAACTACC TGAAGGGGGA GGGAGTGCTA
TGA
 
Protein sequence
MSVVACFKVV PDDTSVRVIG GKVETNVPVK ISTYDKNAIE EAVRLKEKLG WKAIGVTVGN 
TDRKSIRDAL SMGLDEVVAI STGYLDVAGT AMALAETVRG ISPKLVLMAE TTTDSSTSAL
PPYLAQLLGY PLISYVRSLT IHDSTITAER SVGDVEVVEA PLPAVVSVTG EINTPRTPSV
KQIMESAKKP VKQVNFSSQP LAELVEVQPF VTTRKKVIIE KPMAEAVDQL INYLKGEGVL