Gene Msed_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0320 
Symbol 
ID5105478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp275281 
End bp275724 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content48% 
IMG OID640506226 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_001190421 
Protein GI146303105 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGCCG AGAGAATAGC CGAAATTTCC ACAATAGTGT TTGCCATAGC TATCCTCGTG 
TTCCTAGGGG CATTATCATT TCAGTATCTA GGTTACATTT CCCATGGCTC CTACATTCCC
AGCAACGAGA CCGCAATTCC GATCAAGGTA ATAGCTAAGC AGTACGTGTG GGAATTCGTC
TACCCTAACG GGACCGTGTC ATACAACAAG GTTGTGATTC AGGCAGGCAA ACCTTACGTG
TTCCAGCTAA CTTCTGCTGA CGTGATTCAT GCCTTCTACA TAGTACAGCT CGGAATGAAA
ATGCAGGCGA TCCCAGGTTA CACCTATGAC CTTTACGTCC TAGTTAACCA ACCTGGAGTT
TACAACATAT GGTGCGCGGA GTTCTGCGGG CCGGGTCATT ACACCATGAA GGGGATTATG
ATAGTCACTA ACTCCACGGG GTGA
 
Protein sequence
MKAERIAEIS TIVFAIAILV FLGALSFQYL GYISHGSYIP SNETAIPIKV IAKQYVWEFV 
YPNGTVSYNK VVIQAGKPYV FQLTSADVIH AFYIVQLGMK MQAIPGYTYD LYVLVNQPGV
YNIWCAEFCG PGHYTMKGIM IVTNSTG