| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0313 |
|---|
| Symbol | |
|---|
| ID | 5104949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 269672 |
|---|
| End bp | 271474 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640506219 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_001190414 |
|---|
| Protein GI | 146303098 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA TAAGTTCTAT TCTAATAGTA TTGATTTTGC TTGTATTTTC CTCTCTAGGC
TCGGGTCTAG TTTTGCAGGC CCAGGAATCC ATGTACTACG TGCAGACGTC ATCGCCCCAG
TACTCAATTT TACCTGGATC ACAGTTCGTG GAACCGCTTA ACACTGGTCT TACGATCCCG
ATAGCCATAT TGCTTAACTT CACGAACTAT TCATCGCTGA ACAGTGAGCT TCTATACGTG
ATTTCAAGTG GTCATTATTT AACTCCCTTG AAGTTCAGGG AATACTACTA TCCCAGTCAG
TCTTACGTGA ACTCCCTTGA GAACTACTTG GAAGGGTACG GGTTTGTTCC CACAGGGAAC
TATGGACTCA TACTCACCTT TAACGCCACA GTAGGCGAGA TTGAGCAGGC GTTCCACACA
TATATAAACG TGTACTATTA CCCCTTCAAG GATATCTATT GGTTCGGTAA GGTCGGAGAG
AAGAGAGTGG GACCATTCTA TTACTTCACG AATAACGTTA CGCCATCACT TCCCTATGGC
GTGGGTAAGT ACGTGCTTGG GATTGTGGGT ATAGATAATC TTGATCCACA CGCGTACCAG
GGATTGAGGC AGGCTTGGAA TGTACCCATG ACCGAGGGGA AGGGATCCAG CAGTAGCGGG
CTAATTTCAA GCGCAATATT CACTCCCAAT ACGATCCAGC AGTACTTCAA CTTCTCGTCG
CTCTACGCGC AGGGTAAGAC GGGTTCAGGT TCCACGATCG CCATAGAGGG AGTGCCAGAG
TGTTACGTGA ATACCACGGA CATATACTCG TTCTGGAGAC TTTTCAACAT TCCTAGGACT
GGGTCATTCA ACGTTATCAC CCTTGGAAAT GATACCTCGG GAGGTCAATC GGGTGAAAAC
GAGCTGGACG CTGAGTATTC AGGGGCCTTT GCTCCAGGGG CTAATATCGC AATAGTGTTC
AGCGATGGAT ATGTGGGCGG GAAAGCCCTT GTGGGAAACC TCCTAAACTA CTATTATGAG
TACTATTATA TGGCAAACTA TCTTAATCCT GACGTGGTCT CTATCTCAGT ATCGTTACCA
GAGAGCTATC TTGCAGCGTA TTATCCGGCA ATGTTGTACA TGATACACAA CATCATGGTT
CAGCTATCGG TGCAGGGAAC CTCGGTCTTG GCTGCATCAG GGGACTGGGG ATTTGAGTCC
AATCATCCTC CGCCTAACTT CCACATTGGC GTTTACAACA CCATATGGTA CCCGGAAAGC
GATCCACTGG TTACCTCGGT AGGCGGGATA TTCCTCAATG CGACCTCAAC GGGACAGATC
TACTCCTTCT CTGGGTGGGA TTACAGTACA GGAGGCAACA GCGTGGTGTT CCCGGTTCAG
ATATACGAGC TAACCTCCTT GATTCCGTTC ACGCCTATCA CAGTGAGAAC TTACCCTGAT
ATCGCCTTCG TTTCAGCGGG CGGTTACAAT ATACCCGAAT TCGGTTTTGG GCTACCCCTG
ATCTTCGACG GACAGCTGTT CGTGTGGTAT GGGACTAGCG GTGCAGCTCC CATGACGGCT
GCGATGGTTT CGCTTGTGGG ACAGAGGTTA GGCCCACTGA ACTACGCGCT CTATCACATT
TCGTACTCTG GAGAGGTAGT AACGCCCCAT GGAATTATTA AGGGACTGTC AGCCTGGATA
CCCGTTACCT CTGGCAACAA CCCAATGCCG GCCCACTATG GATGGAATTA CGTTACTGGA
CCTGGCACTT ATGACGCGTA CGGTATGGTC ATGGACTTGG GAATGTATGC CGAGTATATC
TAA
|
|---|
| Protein sequence | MKNISSILIV LILLVFSSLG SGLVLQAQES MYYVQTSSPQ YSILPGSQFV EPLNTGLTIP
IAILLNFTNY SSLNSELLYV ISSGHYLTPL KFREYYYPSQ SYVNSLENYL EGYGFVPTGN
YGLILTFNAT VGEIEQAFHT YINVYYYPFK DIYWFGKVGE KRVGPFYYFT NNVTPSLPYG
VGKYVLGIVG IDNLDPHAYQ GLRQAWNVPM TEGKGSSSSG LISSAIFTPN TIQQYFNFSS
LYAQGKTGSG STIAIEGVPE CYVNTTDIYS FWRLFNIPRT GSFNVITLGN DTSGGQSGEN
ELDAEYSGAF APGANIAIVF SDGYVGGKAL VGNLLNYYYE YYYMANYLNP DVVSISVSLP
ESYLAAYYPA MLYMIHNIMV QLSVQGTSVL AASGDWGFES NHPPPNFHIG VYNTIWYPES
DPLVTSVGGI FLNATSTGQI YSFSGWDYST GGNSVVFPVQ IYELTSLIPF TPITVRTYPD
IAFVSAGGYN IPEFGFGLPL IFDGQLFVWY GTSGAAPMTA AMVSLVGQRL GPLNYALYHI
SYSGEVVTPH GIIKGLSAWI PVTSGNNPMP AHYGWNYVTG PGTYDAYGMV MDLGMYAEYI
|
|---|
| |