| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0309 |
|---|
| Symbol | |
|---|
| ID | 5104945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 265576 |
|---|
| End bp | 266454 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640506215 |
|---|
| Product | pyruvate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_001190410 |
|---|
| Protein GI | 146303094 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGGACTCC GAGGTCTGCG ATCTGAGTCA CTCCTTCCAG GGACGTCAGC CTGCCCTGGA
TGTCCTGAGA ACATGGCCAT GAGAATGGTG GGAATGGCCC TGGGTAAGAA CGTTGCCATG
GTTGTAGTGG CAGGGTGTTC CTCCGTAATT CAGGGGATAG GGCCCAAGAA CGCTTACGGC
TATCCTGTGC TTAATATAGC CTTCGCTGCC GGTCCCGCAG CAGCCTCAGG TATGTGGAGG
GCCTTCAAAC AGAGGAACAA GGACGTGACT GTGGTGGTCT GGGCTGGAGA TGGAGGTACA
GCGGACATAG GGTTTGCATC ACTTAGCGGA GCTGCTGAGA GGAACGAGGA CTTCATATAC
CTCTGTGTGG ACAATGAGGC CTACATGAAC TCCGGAGGTC AGAGGAGCGG TTCCACCCCC
CACGGTGCCG TAACCACTAC CACACCTGAA GGGAAGAAGG AGAACAAGAA GGAGTTACTC
TTCATAATGC TTGACCATAA CGTTCCCTAT GTGGCCACGG CATCCGTGGG CTATCCCCAT
GACCTCATGG ATAAGTTGAA GAGGGCCAAG GAAGTGAACG GATTTAGGTA TATCCAGATC
CTTACACCAG ACCCTTATGG TTGGCTATTT GATCCCTCTA AGACCGCTGA GGTTGGCAAG
TTGGCTGTGC AGACGTGTTA TTGGCCCCTC ATAGAGGTTA TGAACGGGAA GGTTAGGGTA
AGTAATGAGT CGCTCCATTG CCTTAAGAAG GAGACCAGAA GGCCCTTGAA GGACTTCCTT
TCTGTTCAGG GCAGGTACAA GAAGCTCCCG GAAAGGGATT ACCTGGAACT AGAGAAGTTC
GTGGATGACC TCTGGGAAAG GATAATCTCC ATGAGCTAA
|
|---|
| Protein sequence | MGLRGLRSES LLPGTSACPG CPENMAMRMV GMALGKNVAM VVVAGCSSVI QGIGPKNAYG
YPVLNIAFAA GPAAASGMWR AFKQRNKDVT VVVWAGDGGT ADIGFASLSG AAERNEDFIY
LCVDNEAYMN SGGQRSGSTP HGAVTTTTPE GKKENKKELL FIMLDHNVPY VATASVGYPH
DLMDKLKRAK EVNGFRYIQI LTPDPYGWLF DPSKTAEVGK LAVQTCYWPL IEVMNGKVRV
SNESLHCLKK ETRRPLKDFL SVQGRYKKLP ERDYLELEKF VDDLWERIIS MS
|
|---|
| |