Gene Msed_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0302 
Symbol 
ID5104938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp260565 
End bp260924 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content45% 
IMG OID640506208 
Producthypothetical protein 
Protein accessionYP_001190403 
Protein GI146303087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.778227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTCCT TACTGCAAGG GGAACTTGAG GATCTGTACT GTAGGATAAG GAATGAAGAG 
ATCGATCTAG TGACCAATGT GGTCAACCTT ACAGAGGTAT ATTACGTTCT CTGCAGAAGA
CTAGGTGCTC AGAGGGCAGA GGAAATTGTT AATAGTATCG TAAAGTCCGG CTACTTCAGC
GTCGTTGGCG TCTCCAAGAA GATATATAGG GAGGTATCTC TGTGTAGGTG TAAGCATGCA
ATTTCCCTCT CTGATTGTTT CTCTATTGCC ACCGCGAAGG CCCGTGGAAT AAAGGCCCTG
TTTAGAAGAG AGAAGGAACT TGAAGGTATT CGGAAGGAGT CTGTGGAGTT CGTTGATTAA
 
Protein sequence
MISLLQGELE DLYCRIRNEE IDLVTNVVNL TEVYYVLCRR LGAQRAEEIV NSIVKSGYFS 
VVGVSKKIYR EVSLCRCKHA ISLSDCFSIA TAKARGIKAL FRREKELEGI RKESVEFVD