Gene Msed_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0298 
Symbol 
ID5104934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp255959 
End bp256447 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content48% 
IMG OID640506204 
Productglyceraldehyde oxidoreductase small chain 
Protein accessionYP_001190399 
Protein GI146303083 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTTG AACCGGACCA AAGGGTTAAA ATAAGGGTAA AGGTAAACGG CGTATATTAC 
GAGGACGAGG TTGAGCCTAG GAAATTGCTC GTGGATTTCC TAAGGGAAAA CCTCAACCTC
ACGGGAACCA AGATAGGTTG TGACACCTCA ACCTGTGGAG CCTGCACTGT CCTGGTGAAC
GGGAAATCAG TTAAGTCCTG CACAATGCTT GCCGTTCAAG CCAACGGCAA GGAGATTACC
ACGATCGAAG GACTGTCAAG TGATTCGAAA CTGAGCCCAG TGCAACAGGC GTTTAAGGAC
AACTTTGCTC TTCAGTGCGG TTTCTGTACC GCAGGGATGA TAGTTCAGGC CCATTACATC
CTTTCGGAAA AGAAGGAACT CACAGAAGAG GAGGTAAGGG ACATGATACA CGGTAACATC
TGCAGATGCA CCGGGTATCA GAACATAGTG AACGCAATAT TAGACGCCTC TAGGAGGATG
AGAGCATGA
 
Protein sequence
MKVEPDQRVK IRVKVNGVYY EDEVEPRKLL VDFLRENLNL TGTKIGCDTS TCGACTVLVN 
GKSVKSCTML AVQANGKEIT TIEGLSSDSK LSPVQQAFKD NFALQCGFCT AGMIVQAHYI
LSEKKELTEE EVRDMIHGNI CRCTGYQNIV NAILDASRRM RA