| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0280 |
|---|
| Symbol | |
|---|
| ID | 5104916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 239905 |
|---|
| End bp | 240330 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640506186 |
|---|
| Product | signal-transduction protein |
|---|
| Protein accession | YP_001190381 |
|---|
| Protein GI | 146303065 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.460001 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.121609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTA TTGTAAAGCA TCTGATAAGT AAAAATCCAG TGTCGGTGGA GAGGGGAACG
CCAGTGATCA AGGCCGTTGA GCTCATGGCC TCTCATAACA TGGGCTCTGT CATAATTACC
AAGGATGGTA AGCTCGCTGG GATAATTACT GAGAGGGACG TGATTAGGGG TATCGCTCGG
GGCATAAGCC TCAATCAACC CGTAGAGGAG TTTGGAACCA TGAAGGACCT CGTAACGGTG
AGAGAAGATG ATACCGTGTA TACAGCCGTC AAGAAGATGG CCGAGAGAAA TCTAAGGCAT
CTAATCGTGG TAGACCGAGA CGGGAACCTG AAGGGAGTGA TCTCAGTCAG GGACATAATC
AGGGAATCTC ACGTGTTGAA GGCAATCTCC CAGGTCGAGG GAGAGGAATT TCCTGGAAGT
GATTGA
|
|---|
| Protein sequence | MASIVKHLIS KNPVSVERGT PVIKAVELMA SHNMGSVIIT KDGKLAGIIT ERDVIRGIAR
GISLNQPVEE FGTMKDLVTV REDDTVYTAV KKMAERNLRH LIVVDRDGNL KGVISVRDII
RESHVLKAIS QVEGEEFPGS D
|
|---|
| |