| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0278 |
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| Symbol | |
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| ID | 5104914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 237774 |
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| End bp | 239060 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506184 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_001190379 |
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| Protein GI | 146303063 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.914364 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0835983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCTCG CTGAAGTTTT CTCAGAATTC GCTACCTCAA CCTCGTACTC CGACCTTCCC
GAGAAGTCGG TGCACGAGGC GAAAAGGAGG GTTCTTGACT CCCTTGCGGT GGCCTACGCT
TCAACGTCGT CACCGCCAGC TGAGGTCGTC AGAAAGGCAA TTCCAAGTTT TCAGGGACAG
GGCTTGCTCC TAGGGGGAGG AAACTCTTCC CCAGACATGG CTGCGTTCTA CAACACCCTC
CTCATCAGGT ATCTGGACTT CAATGATACC TATCTTTCCC TTGAACCTCT CCATCCCTCT
GACATGATTG GCGGTCTCCT TGCAGTTAAC CCTAGGCTAA GCGGAAAGGA ATTGATAAGG
GCTATCGTTT TAGGGTATGA GGTTTCCACT AGGCTATGCG ATTCCACGTC CCTTAGGAAA
AAGGGATACG ACCACGTAAA TTTCCTCCAG GTTGGGTCGG CAGTGGCACT TGGAGTGGCC
TTGGGTCTTA ACAAGGAGCA ATTGGTGAAC GCAATCTCGA TCACCACTGT GCCACACGTG
GCCCTCCGGG AAACTCGTTC AGGAAGTCTT AGTATGTGGA AAGCTGGGGC AACCGCTGAG
GCAGTGAGGA ACTCCGTCTT TGCTGTGCTC TTGGCAAAGG CTGGATTCAC GGGTCCTTCG
ACTCCCTTTT CAGGGAAGAT GGGATTCAGG AACGTAATTG CACCGGACAT GTCAGATGCC
CCCTTCAAGA GCCTGGGGAC CACCAAGATC CTAGAGACGT ACATAAAGAA ATATCCTGTG
GAGTATCACG CTCAAGCAGC TGTTGAGGCA GGTATCAAGT TAAGGAAACA GCTGATGGGG
GATATAACCA AGGTAACCGT GGAGACCTAT GAGGCTGGAA GGACTATCCT AGCTGACGAG
GGAAAGTGGG ATCCTAAGAA CAAGGAAACC GCTGATCACA GCCTTCCCTT CATAGTAGCA
GTCACCCTGC TAACTGGTAA GTTCTGGCTC GATGCATACG ATCTTGTGGG GGATCCCAAG
GTCACGGAAC TCATGAAGAA GATTGAGGTC GTGGAGAACG AGGAGTACAC CAAGGTCTAC
CCTAGCGAGC TACCCACCAA GATAGTGGTG AAGACCACCT CTGGTACTTT CTCAGAGGAG
GTTAGAATTC CTAGGGGTCA CCACAAGAAC CCCATGAGCG ACGAGGAGGT GGAGGAAAAG
GCAATGAAAC TGGGTCTAGG GAAGGACATC GTGAATAAGA TCTGGAACCT GGAGAAAATG
GAGGTGAAGG ACATTGTCTC TTGGTAA
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| Protein sequence | MELAEVFSEF ATSTSYSDLP EKSVHEAKRR VLDSLAVAYA STSSPPAEVV RKAIPSFQGQ
GLLLGGGNSS PDMAAFYNTL LIRYLDFNDT YLSLEPLHPS DMIGGLLAVN PRLSGKELIR
AIVLGYEVST RLCDSTSLRK KGYDHVNFLQ VGSAVALGVA LGLNKEQLVN AISITTVPHV
ALRETRSGSL SMWKAGATAE AVRNSVFAVL LAKAGFTGPS TPFSGKMGFR NVIAPDMSDA
PFKSLGTTKI LETYIKKYPV EYHAQAAVEA GIKLRKQLMG DITKVTVETY EAGRTILADE
GKWDPKNKET ADHSLPFIVA VTLLTGKFWL DAYDLVGDPK VTELMKKIEV VENEEYTKVY
PSELPTKIVV KTTSGTFSEE VRIPRGHHKN PMSDEEVEEK AMKLGLGKDI VNKIWNLEKM
EVKDIVSW
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