| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0272 |
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| Symbol | |
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| ID | 5103892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 229692 |
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| End bp | 230762 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640506178 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001190373 |
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| Protein GI | 146303057 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0882804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0745617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGC TTCTGATCTC CACAGTCTCA GACTTCGCCA GGAGGGAGAT CCTGAGGGTT
GCCGATAAGA TTGATAGGGA TGACTTCTAC CCTCGGGATC TAATCTCGAA GATGGGAGAA
CTTGGGATCC TGGATCCCCT TCACCACGGT GCAGAACTCT TGGACTCCAT GCTCTGCTTG
GAGGAGATAG CCAAGGTTAG TGGTTCAGTG GCGCTCATAC AGGATGTCCA GGGGGAACTC
GTGAACGCTC CCCTTAGAAG GTATGGAAGG GATAACGACC TCACAGAGAA GATAGCAGAG
GGCAAGATCC TGGGCTCATT CGCCCTGAGC GAGCCGTGTT GCGGATCCGA CACGTCTGCC
ATGAGATCAA CAGCGAGAAA GGTTAACGGT ACCTGGAAGA TTGACGGGGA AAAGATGTGG
ATAACTCAAG GACTTTACGC CAACGTGTTC TTGGTCGCAG CTAAGAACGA CGAGGGGAAG
ATCTCAGCGT TCCTGGTGAG GGACACCCGG TGCATGGAGA GGGAAAAGAT CGAGGTTCAG
GGGAATAGGG GAACGGGGAC GGCGAGGATA AGGATGAACG AGTGCGAGGG AGAACTCATA
GGTGGATGGG AGGTAATAAA GTACGCCCTC GCCATAGGTA GGATAGCCAT TTCCGCAATC
TCCCTGGGAT TAGCCCTAGG TGCCATGGAG GAGGCATACA ACTGGGCAAA GGAAAGGCAG
GCCTTTGGGA AAAGGCTCAT GGAGCACGAG GGGATAGCGT GGTTGTTCTC CGACTCAATC
GCAGAGTTGG AATCGGTCAA GGCGCTCCTA GACGCAACAT GTAACGCCTT TACCAAGGAC
TGGAAGAGGG CCGAACCCCT GATCTCTTCC CTGAAACTGA TCTCCTCGGG AGTCGCAAAC
AGGGTGGTAG ATAGGATGGT CCAAGTCATG GGTGGGATGG GATACGCAAA ATTGACTAGG
GTGGAGCGCG CATATAGGGA CGTGAGGTTA ACCAGAATAG GGGAGGGAAC AGACGAGGTT
CAAAGAATAA TCCTCTCAAG ACACATAGAA GATCTTGTCC ACGAGCTTTA A
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| Protein sequence | MDELLISTVS DFARREILRV ADKIDRDDFY PRDLISKMGE LGILDPLHHG AELLDSMLCL
EEIAKVSGSV ALIQDVQGEL VNAPLRRYGR DNDLTEKIAE GKILGSFALS EPCCGSDTSA
MRSTARKVNG TWKIDGEKMW ITQGLYANVF LVAAKNDEGK ISAFLVRDTR CMEREKIEVQ
GNRGTGTARI RMNECEGELI GGWEVIKYAL AIGRIAISAI SLGLALGAME EAYNWAKERQ
AFGKRLMEHE GIAWLFSDSI AELESVKALL DATCNAFTKD WKRAEPLISS LKLISSGVAN
RVVDRMVQVM GGMGYAKLTR VERAYRDVRL TRIGEGTDEV QRIILSRHIE DLVHEL
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