Gene Msed_0263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0263 
Symbol 
ID5103883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp222995 
End bp223393 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content44% 
IMG OID640506169 
ProductDoxX family protein 
Protein accessionYP_001190364 
Protein GI146303048 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0153873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.498274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TAATTGGTTC AATAGGTCTC CTGATTTTCA GGCTGCTCTA TGGAGTAGCC 
TTGATACCCC ATTCTCTGCC TAAAATATCC ATGAACAAGC AAGTCAAGGA GATGATGAAA
CAGATCGGAA TCCCTGGGGG ATTTGTGGAC CTATCCTTGA TAATAGAGCT AGTAGGAGGT
TTACTCGTGA TTCTAGGTAC CATTTACGTG CTAGTTGATG CTGTCTTAGT GTTATTCTTC
CTAGGAACTA CTGTGGTGAG CGTGACCAAG ATGAAGAAAC CCCTTCCATC CATCACTAAC
CCAGGTTATG ACTTAGATAT CCTTTTCCTA GCTGGAGCAA TCCTGCTACT ACTTCTAGGT
CCAGGTCCTA TATCCTTGTT ACCAGGTCCT CAAATCTAG
 
Protein sequence
MSELIGSIGL LIFRLLYGVA LIPHSLPKIS MNKQVKEMMK QIGIPGGFVD LSLIIELVGG 
LLVILGTIYV LVDAVLVLFF LGTTVVSVTK MKKPLPSITN PGYDLDILFL AGAILLLLLG
PGPISLLPGP QI