| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0256 |
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| Symbol | |
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| ID | 5103876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 216616 |
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| End bp | 217563 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506162 |
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| Product | glyoxylate reductase |
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| Protein accession | YP_001190357 |
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| Protein GI | 146303041 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.466331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAGG TACTGGTAAC TAGAAGGATC CCAGGACCTT GGCTCGACCT TCTTAAAAGA
GAGACTGAAG TGGACATCTG GGAGGGAAGA GATCCTCCAC CTAGGTCTTG GATACTTTCC
AGAGTAAAGG ATAAGGATGG GTTGTTGGTC ACCCTAACCG AGAGGGTAGA TAGGGAAGTG
ATAGACGCTG GAGTAAACCT GAAGGTGATT AGTACCTATA GCGTGGGTTT CGATCACATT
GACGTGAAAT ACGCCCTCAG TAAGGGGATT AGGGTAACAA ACACGCCAGA CGTTCTGACT
GACGCTACCG CAGACCTCAT ATTTGGCCTT CTATTAGCGG TAGCCAGGAG GATAGTGGAA
GGGGATAGAT TGATAAGAGA TGGTAAATGG AACCTTCCAT GGTATCCGGA ATTCATGCTT
GGTAAGGAAG TGAGTCATAG CACCCTGGGA ATCCTTGGAA TGGGAAGAAT AGGCAGGGCT
GTCCTGAGGA GGGCCAAGGG ATTCGACATG AATGTGATAT ATTACAGCAG GAAACCTCAC
GATGTGGATG CGAAGTTTGT GGATTTGGAC ACGCTTCTCA CAGAATCCGA CTTTCTAGTG
GTCACGGTGG ATCTGAACCA GGAAACATAT CACATGCTGG ATTACTCAAA GTTAATGAAG
ATGAAGAGGA CGGCTTTCCT TGTTAATGCG TCCAGGGGAC CAGTGGTCAA GGAAGAGGAT
CTGGTCAGGG TATTGTCGGA GGGGAGAATT GCGGGGGCTG CCCTAGACGT ATTTGAAAGG
GAACCAATTT CACCGGACAA CCCACTGGTT AAGTTTCCCA ACGTGGTATT AACTCCTCAC
CTAGGGAGTG CCACGAGGGA GACAAGGGAG AAGATGGCTG AGATAGCCGT GAAAAATCTG
CTCAATTGTC TTAAAGGAGA GAGCCCACTT TATGAAGTCA AATTATGA
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| Protein sequence | MYKVLVTRRI PGPWLDLLKR ETEVDIWEGR DPPPRSWILS RVKDKDGLLV TLTERVDREV
IDAGVNLKVI STYSVGFDHI DVKYALSKGI RVTNTPDVLT DATADLIFGL LLAVARRIVE
GDRLIRDGKW NLPWYPEFML GKEVSHSTLG ILGMGRIGRA VLRRAKGFDM NVIYYSRKPH
DVDAKFVDLD TLLTESDFLV VTVDLNQETY HMLDYSKLMK MKRTAFLVNA SRGPVVKEED
LVRVLSEGRI AGAALDVFER EPISPDNPLV KFPNVVLTPH LGSATRETRE KMAEIAVKNL
LNCLKGESPL YEVKL
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