| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0255 |
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| Symbol | |
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| ID | 5103875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 215235 |
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| End bp | 216422 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506161 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001190356 |
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| Protein GI | 146303040 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.299198 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCGT ACCTACACGC AACACTTGCC TCCACAATCG CATGGGCAGG AAATATTTAT
GACCTGCTAA TTATTACTTA CGTTTATCAA TATATTGAAA GCACATTTCA CATAGGCTAT
GTAATGGTTT CCCTACTCTT TTCCTTTGGA CTATTGGGGA GGGTGGTTGG AGGTACACTC
TTTGGAAGGT TTTCGGACAA GTACGGAAGG AAACCTGTCC TGATATTCAC TACGTTGGGG
TATTCGTTGT CTCATGGGAT TATGGCCTTT TCCCCAAACG TGATAGTACT TTTCCTGGCG
AGACTGTTTG AGGGAGTATT CATGGGAGGA GAGTGGACTG CTGGAACAGT AATAGCCTAT
GAGAGTGCCC CCGTATCAGT CAGGGGAATA CTTACAGGGA TAGTCCAGTC TGGGTATGGA
ATGGGTTACG CGCTCACAGG GGCAATGTAC ATCTACTTTT CACCTCTCAT TTCGGAGGAT
TGGAGAATCT TTCTAGCCAC TGGAACGTTT CCCCTCCTTC TGGTACCTTA CATGAAACTG
AAGGTTCCAG AATCCAAACC CACAAGGGTA TCCAAGGTAA AAGTTGAGTA CAGGGATTAC
CTAAACCTCA TCCTTAAGTC TACCTTGGCA ATGTCAGGGA TGTTTGTAGC CTACTTCTCT
GTTTTCGGAA ATTATCCAAC CTTTGCGGAA AAATTAATTG GAATCTCTCC CTCTACTTTA
GGGTTAACAC TACTGATCTC CAACGTAGGA CTTGCAATAT CCTTTATCGT GTTTGGTCGC
CTTGCAGACA GGATAAACGT AAGGAAACTA ATCCTTTCTG CCCTGGTTAC GCTCACAGTA
TCCCTCTTCT TTACCGTTCC TGGATTCATC AACCTAGGCC CTCTTGCCTC AATCATCTCT
ACGATGGTTT ATGCCTCATC GTGCGGATTC TGGCCCCTGA TACCGCTTCT CCTTGCCCAC
TCCGTTCCCG TGGAGGTTAG GGGGCTCTTG TCGGGAATGT CCTATAACAT AGGCGGGCTT
GTGGGAGGCA TTGCGGAAGT CATCACGGGG ATAGCAATGC AATACATGGG TATCTTGGGA
ATGGCCAAGA TAATCGACAT CATTAATCTG GTTGCTCTCA TCACGGTGTT TATTTCAGTC
ATTACATGGC CAAGGGCAGC CATCCATACT TCGAGCCATA ATGTATAA
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| Protein sequence | MKPYLHATLA STIAWAGNIY DLLIITYVYQ YIESTFHIGY VMVSLLFSFG LLGRVVGGTL
FGRFSDKYGR KPVLIFTTLG YSLSHGIMAF SPNVIVLFLA RLFEGVFMGG EWTAGTVIAY
ESAPVSVRGI LTGIVQSGYG MGYALTGAMY IYFSPLISED WRIFLATGTF PLLLVPYMKL
KVPESKPTRV SKVKVEYRDY LNLILKSTLA MSGMFVAYFS VFGNYPTFAE KLIGISPSTL
GLTLLISNVG LAISFIVFGR LADRINVRKL ILSALVTLTV SLFFTVPGFI NLGPLASIIS
TMVYASSCGF WPLIPLLLAH SVPVEVRGLL SGMSYNIGGL VGGIAEVITG IAMQYMGILG
MAKIIDIINL VALITVFISV ITWPRAAIHT SSHNV
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