| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0252 |
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| Symbol | |
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| ID | 5103872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 212432 |
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| End bp | 213385 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506158 |
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| Product | daunorubicin resistance ABC transporter ATPase subunit |
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| Protein accession | YP_001190353 |
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| Protein GI | 146303037 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | [TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.297756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCGA TTGAGACAGA AAATCTTACA AAAAAATATG GAGATTTTGT AGCTGTTGAT
CACGTCTCAT TCAAGGTGGA GAAAGGGGAG ATATTTGGTC TTTTGGGTCC GAACGGGGCA
GGGAAAACTA CCACCATCAA GATGCTCACA GGTTTAACTC CACCTACGGA GGGGGAGGCA
ATAATCGCGG GGTATAGTAT AAGGAAAAAT CCAATAGAGG TAAAGTCGAG GATAGGATGG
ATCTCTTCGG AAGTCATCCT GGATGACGAC TTAACTGCTT GGGAGAACCT AGAAATTCAG
GCCAGGCTCA CAGGAGTCAA GAACTGGAAG GAAAGGGCAA CCTCTCTTCT TAAGTACTTT
GGAATCCTCG AGTTCGCCAA TCGTAGGACT GGAAAGTTCT CCACTGGAAT GAGGAAGAAA
CTAGAGGTTT CCATGGCCCT ACTCAATTCC CCAGAAGTGA TCTTCATGGA TGAACCCACA
ATTGGGCTAG ATGTGAACAC CAGGGCTACC ATGTGGAATC TGATAAGGGA AATAAACAGG
GATTACCAGG TGACAATACT CTTGACTACC CATTACATGG AGGAGGCAGA TTCCTTGTGT
TCAAGGATAG GGATCATTAA CAAGGGGAAA ATCATCGCAC TGGGAACTCC AGAGGAATTG
AAGGCCAGAT ATGGAGGGGA TATAATAGAA ATCGAGCTTA AGAACGGGGC AAACGTCAAC
GTGGGGCTCG AGAATGCGGT AGTTAGTAAT GGCAAGGTCA GGATAAAGGT GAACAATGCG
GAGACCATGC TAATGGACGT CATAAGGGCG ATAGGAAGCG ATAACATCAA GGGCATTAAG
ATAAACAAGT CTAGCCTCGA CACGGTTTTC ATAAATCTCA CGGGAGGAAC AATTGAGGAG
CAGGACTTTG ACGCCAGGAA GTTCTACGCC ATGATAAGGA GGGCGAGAAG ATGA
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| Protein sequence | MYSIETENLT KKYGDFVAVD HVSFKVEKGE IFGLLGPNGA GKTTTIKMLT GLTPPTEGEA
IIAGYSIRKN PIEVKSRIGW ISSEVILDDD LTAWENLEIQ ARLTGVKNWK ERATSLLKYF
GILEFANRRT GKFSTGMRKK LEVSMALLNS PEVIFMDEPT IGLDVNTRAT MWNLIREINR
DYQVTILLTT HYMEEADSLC SRIGIINKGK IIALGTPEEL KARYGGDIIE IELKNGANVN
VGLENAVVSN GKVRIKVNNA ETMLMDVIRA IGSDNIKGIK INKSSLDTVF INLTGGTIEE
QDFDARKFYA MIRRARR
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