Gene Msed_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0248 
Symbol 
ID5103868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp209037 
End bp209624 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content41% 
IMG OID640506154 
Producthypothetical protein 
Protein accessionYP_001190349 
Protein GI146303033 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1192] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.598961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.906781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGATAA AAGTAAATGT ACTAGGGGTC AAAGAAGGAG TAGGGAAGAC AAGCGTAGCC 
TTACATCTGT CTAGGGAACT GGCTAAATTG GGCAAGACTC TGATAGTGGA TAAAACCCCT
ACCTGTGGCC TTGGGAGGAA GATGTGGATA AATGGGGAGA TGCTATGCGA AGGTAACCTT
TGCATTCTTA AGCTCTTCAG GAAACCTTTT AGAATAGATT CAAATGATCT AGAGATAGCC
TGTAGAAAGT TGCAGGAGGT TTACTCTCAG AGCTGGGATT ACGTAGTGAT AGATAATTTC
TCTTGTGCGG TTCCGCATAA TCCCATTATA AAAGTGGATG CGGATTCACT TCCTCTCTTT
GTTACTGATC CCCTCAACCT TGGGGTAACG CTAGAATATA GCGAGAAGTT TTATAGCAAG
TTCGGACTCG TGATTAACCA GGTACCTGAG GAATACTCAG TATCTAAAGA TGTAGAAAAA
CTTTTTCAAA TAGTTGTGAG TATTCCTTTT GTTGAGGAGA ATAGCTTTGG GAAGTACCTT
CAGTCCGTCG TAATGAGTAT AGTAGAGAGG AGAAATAGCT TCATCTAG
 
Protein sequence
MLIKVNVLGV KEGVGKTSVA LHLSRELAKL GKTLIVDKTP TCGLGRKMWI NGEMLCEGNL 
CILKLFRKPF RIDSNDLEIA CRKLQEVYSQ SWDYVVIDNF SCAVPHNPII KVDADSLPLF
VTDPLNLGVT LEYSEKFYSK FGLVINQVPE EYSVSKDVEK LFQIVVSIPF VEENSFGKYL
QSVVMSIVER RNSFI