| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0241 |
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| Symbol | |
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| ID | 5104107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 201295 |
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| End bp | 202449 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506147 |
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| Product | UDP-sulfoquinovose synthase |
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| Protein accession | YP_001190342 |
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| Protein GI | 146303026 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.603555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCTC TTATCCTTGG CATTGATGGG TACATTGGGT GGGCCTTGGC CCTGAGGCTA
GTGGCCAAAG GGCATGAGGT TGCAGGGATT GACAACCTTT CCACGAGGAG ATTTTCGGCC
GAAGTGGGAT CAGACTCCGC ATTTCCATTG CCGTCCCCAA AGGAAAGGGT AGAAGCGGTG
AAGAGGAAAC TGGGCGCTGA CATTAAGTTC ATTGTAGGAG ACGCAAAGGA TAAGGCATTA
CTGGAGGAGA CCATTAGGGA TTTCAAACCT GATGTGATAG TTCATTTTGC CGAGCAAAGA
TCGGCTCCCT ACTCAATGAA GGACTACGAA CATGCATGGT ACACTCTCGA AAATAACCTG
AAGTCCACCC TTAGCCTATT GTACGCAGTA AGCGAGATAG ATCCTTCAAT TCACATACTC
AAGATGGGTA CCATGGGTGA GTATGGTACC CCAAACTTCG ACATACCTGA ATCGGCATTC
GTCAAAGCCA TTATCCAAGG GAAAGAGGAT ACAATCCCAA CCCCGAAGTG GGGTGGCTCA
TACTATCACT GGAGCAAGAT CTTCGACACA TTTCTTATCC TGTTTAAGGG AAAGCTCTCC
AATCTCACCG TAACTGACAT AATGCAGGGA CCCGTTTATG GAACAAGGAC GGAAGAGATA
ACAGACGAGG AGCTACGCAC TAGGTTTGAC TTCGACGAAA CGTGGGGGAC AGTGATAAAC
AGGTACTGTG TGGAGGCAGT ACTGGGTTTA CCCTTAACAC CTTACGGTAA AGGGAAACAG
ACTAGGGGTT TCATTTCCCT TGAAGATAGT GTAGAGGCCT TAAGATTGCT CATAGAAAAT
CCACCCAAGG ATGGCGAGTA TAGGGTCGTG AATCAGTTCG CTGAGGTTTA CAATGTGAGA
CAACTTGCCG AGATTGTAAA GAACGCTGCG GAGGAATTGG GGCTGAAGAC TGATATAACA
CACGTGAAGA ACCCTCGAGT TGAGGCCGAG GAACACTACT ACAACCCTGA GGTAAAAGTT
CTACCCTCAC TTGGATTCAA ACCTAAAAGG AACATTAGAG ATGAGACCAA GGTTATGATA
AAGGATCTCC TCCCATATAA GGAGAGACTG GAAAGCTTCA AGCATGTTAT AATGCCAAAG
ACGGTGTGGA AGTAA
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| Protein sequence | MKALILGIDG YIGWALALRL VAKGHEVAGI DNLSTRRFSA EVGSDSAFPL PSPKERVEAV
KRKLGADIKF IVGDAKDKAL LEETIRDFKP DVIVHFAEQR SAPYSMKDYE HAWYTLENNL
KSTLSLLYAV SEIDPSIHIL KMGTMGEYGT PNFDIPESAF VKAIIQGKED TIPTPKWGGS
YYHWSKIFDT FLILFKGKLS NLTVTDIMQG PVYGTRTEEI TDEELRTRFD FDETWGTVIN
RYCVEAVLGL PLTPYGKGKQ TRGFISLEDS VEALRLLIEN PPKDGEYRVV NQFAEVYNVR
QLAEIVKNAA EELGLKTDIT HVKNPRVEAE EHYYNPEVKV LPSLGFKPKR NIRDETKVMI
KDLLPYKERL ESFKHVIMPK TVWK
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