Gene Msed_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0237 
Symbol 
ID5104103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp197199 
End bp198014 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content49% 
IMG OID640506143 
Productfructose-bisphosphate aldolase 
Protein accessionYP_001190338 
Protein GI146303022 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.239509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGAC TCGACATTAG GTTGAAAAAA CTATTTCACA GGGGTAAGGC CTTTGTTGTG 
GCCTTGGACC ACGGACTAGT AATGGGTCCC CTTAGAGGGA TAGAAAACGC GATGAGCGTG
GTAAAGAAGA TGGGCAATTA TCCGGATGCC TTGCAGATGA CCCCAGCCAT GCTAAGAACG
GTAGAGGAGA ACTTCTACTC CAGGTCATCT CCAATGTTAA TTGCTAGGCT TGATACTGCA
AACGTTTGGA GAGACGCTAG AAAGTACGAT CAAGGATACT ACTCCATGGT CTATGAGGTC
AAGGAAGCCG TAAGGGCAGG AGCAGACGCC GTGGTCACGT ACCTAGTGGT GGGCTACGGA
GATGACAGGA TAGAGGGATA CAACCTGGAA CAACTCTCCA GGGCTAGAAG AGAAGCTCAA
GATTACGGGC TACCCTTCAT TATAGAGCCA CTCTTCGTGA GAAAGGAGAT AACGGACTCT
ATTAAGGAGA CCAACGCTGT AAAATACGTT TCCAGGCTGG CCTCGGAAAT AGGTCCAGAT
CTGTTAAAGG TAGACTACAC GGGAGATAAG AACGGATTTG CTTCCGTGGT CGAGGCGTCC
TTTGCTCCCA TTCTCATAAG GGGCGGACCA AAAACCTCAA ACGACCTCGA ATTCTTGAAG
ATGCTGAGAG ATGCTCTAGA CTCAGGCGCC TCTGGGATTA CTGTGGGGAG GAATCTATGG
CAATCGCAGA ATCCAGATCT TATGGCACAG GCTGTTTCCA AACTAGTTCA CGAAGGAGTA
TCTCCTGAGG AGGCTGTAAA GATATTGCAA AAATGA
 
Protein sequence
MSGLDIRLKK LFHRGKAFVV ALDHGLVMGP LRGIENAMSV VKKMGNYPDA LQMTPAMLRT 
VEENFYSRSS PMLIARLDTA NVWRDARKYD QGYYSMVYEV KEAVRAGADA VVTYLVVGYG
DDRIEGYNLE QLSRARREAQ DYGLPFIIEP LFVRKEITDS IKETNAVKYV SRLASEIGPD
LLKVDYTGDK NGFASVVEAS FAPILIRGGP KTSNDLEFLK MLRDALDSGA SGITVGRNLW
QSQNPDLMAQ AVSKLVHEGV SPEEAVKILQ K